RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ADPRHL2Q9NX46 363 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 VPS4AQ9UN37 437 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PSMD13Q9UNM6 376 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 MRPS23Q9Y3D9 190 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TCAF1Q9Y4C2 921 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PCDHGA10Q9Y5H3 936 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PSMD11O00231 422 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 LINC00032P0C843 101 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ITIH1P19827 911 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 CORO1AP31146 461 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 SEMA5AQ13591 1074 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 HNRNPDQ14103 355 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TRIP4Q15650 581 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 CYP2A13Q16696 494 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 SLC9A4Q6AI14 798 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ZNF544Q6NX49 715 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 RFWD3Q6PCD5 774 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ZNF614Q8N883 585 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 LMO3Q8TAP4 145 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 UTP15Q8TED0 518 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 DPF3Q92784 378 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TEKT5Q96M29 485 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TBATAQ96M53 351 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PRMT5O14744 637 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 SYN3O14994 580 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ATG7O95352 703 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 GSTM1P09488 218 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 HPCAL1P37235 193 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 POLD2P49005 469 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 SLC16A1P53985 500 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 GNG2P59768 71 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 MPP1Q00013 466 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 KHDC1Q4VXA5 237 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 VARS2Q5ST30 1063 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PIGWQ7Z7B1 504 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ZBTB46Q86UZ6 589 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 FBXO30Q8TB52 745 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TADA1Q96BN2 335 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 NFKBIZQ9BYH8 718 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 NADKO95544 446 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ACADMP11310 421 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 SCNN1AP37088 669 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ARL13AQ5H913 290 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ESRP1Q6NXG1 681 aaKnown RBP13.22□□□□□ -0.29
PTPRK-204ENST00000368210 FUT10Q6P4F1 479 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 KRT74Q7RTS7 529 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 ROGDIQ9GZN7 287 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 PLK2Q9NYY3 685 aa13.22□□□□□ -0.29
PTPRK-204ENST00000368210 HTR3EA5X5Y0 456 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 EFCAB10A6NFE3 127 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 FYNP06241 537 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 OGDHQ02218 1023 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 SYPL2Q5VXT5 272 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 METTL21CQ5VZV1 264 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 IDO1P14902 403 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 NRLP54845 237 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 POM121L1PQ3SYA9 428 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 CCDC157Q569K6 752 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 CNSTQ6PJW8 725 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 RD3Q7Z3Z2 195 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 C8orf59Q8N0T1 100 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 RTKNQ9BST9 563 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 ZNHIT2Q9UHR6 403 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 GOLGA4Q13439 2230 aaKnown RBP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 PPEF2O14830 753 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 EFCAB14O75071 495 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 ZNF24P17028 368 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 NMBRP28336 390 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 CCL14Q16627 93 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 C5orf22Q49AR2 442 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 DENND6AQ8IWF6 608 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 DDX1Q92499 740 aaKnown RBP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 TMEM216Q9P0N5 145 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 RAPGEFL1Q9UHV5 662 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 PMF1-BGLAPU3KQ54 211 aa13.21□□□□□ -0.29
PTPRK-204ENST00000368210 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
PTPRK-204ENST00000368210 A0A0G2JPF8 293 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 HNRNPCL3B7ZW38 293 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 PTGES3LE9PB15 166 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 FBP2O00757 339 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 ANXA6P08133 673 aa13.21□□□□□ -0.3
PTPRK-204ENST00000368210 HNRNPCL4P0DMR1 293 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms