RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 SLMAPQ14BN4 828 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 HSP90B2PQ58FF3 399 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 HSP90AB4PQ58FF6 505 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 GORABQ5T7V8 394 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 SLC35E4Q6ICL7 350 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 SPATA21Q7Z572 469 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 IQCA1Q86XH1 822 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 APLFQ8IW19 511 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 SFTPA2Q8IWL1 248 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 TMEM57Q8N5G2 664 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 CNNM3Q8NE01 707 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 N4BP2L2Q92802 583 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 RBM17Q96I25 401 aaKnown RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 ZNF583Q96ND8 569 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 TBCBQ99426 244 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 PRPF18Q99633 342 aaKnown RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 JPH2Q9BR39 696 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 TUBB2BQ9BVA1 445 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 PARD6BQ9BYG5 372 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 DCTPP1Q9H773 170 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 ANKZF1Q9H8Y5 726 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 TRPV5Q9NQA5 729 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 DDX19AQ9NUU7 478 aaKnown RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 IRAK4Q9NWZ3 460 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 CORO1CQ9ULV4 474 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 DHDHQ9UQ10 334 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 CNPY2Q9Y2B0 182 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 TSPOAP1O95153 1857 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 TAF1P21675 1872 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 RAPGEF6Q8TEU7 1601 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 NSD2O96028 1365 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 DDX60Q8IY21 1712 aaKnown RBP3.72□□□□□ -1.81
PTPRC-202ENST00000367364 LAMA4Q16363 1823 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 ZNF318Q5VUA4 2279 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 SAMD9LQ8IVG5 1584 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 SETBP1Q9Y6X0 1596 aa3.72□□□□□ -1.81
PTPRC-202ENST00000367364 RPGRIP1LQ68CZ1 1315 aa3.71□□□□□ -1.81
PTPRC-202ENST00000367364 CDHR2Q9BYE9 1310 aa3.71□□□□□ -1.81
PTPRC-202ENST00000367364 OVOS2A0A0G2JMS6 1433 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 OVOS2A0A0J9YW53 1432 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 PLCH2O75038 1416 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 NPATQ14207 1427 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 OVOS2Q6IE36 1432 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ADGRB3O60242 1522 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 hCG_2014768A0A024R1R8 64 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 BLOC1S5-TXNDC5H3BN57 136 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ZIC3O60481 467 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CBX6O95503 412 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CYP21A2P08686 494 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 PRG2P13727 222 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 TUBB8Q3ZCM7 444 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CMPK2Q5EBM0 449 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 FAM209BQ5JX69 171 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ARMCX5Q6P1M9 558 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 GFRALQ6UXV0 394 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 LUZP1Q86V48 1076 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 TMEM219Q86XT9 240 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 TMEM139Q8IV31 216 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CCDC50Q8IVM0 306 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 MYO1HQ8N1T3 1032 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CEP112Q8N8E3 955 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ANKRD52Q8NB46 1076 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 PARD3BQ8TEW8 1205 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 LRR1Q96L50 414 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ZNF396Q96N95 335 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-202ENST00000367364 YME1L1Q96TA2 773 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 BPIFA3Q9BQP9 254 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CRACR2AQ9BSW2 395 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 CLPBQ9H078 707 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 VCPKMTQ9H867 229 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 PLEKHA5Q9HAU0 1116 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 TMEM160Q9NX00 188 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ANKRD10Q9NXR5 420 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 MTMR6Q9Y217 621 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 ATP6V1DQ9Y5K8 247 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 NUP155O75694 1391 aa3.71□□□□□ -1.82
PTPRC-202ENST00000367364 NUP153P49790 1475 aaKnown RBP3.71□□□□□ -1.82
PTPRC-202ENST00000367364 TROQ12816 1431 aaPredicted RBP3.7□□□□□ -1.82
PTPRC-202ENST00000367364 ATP7AQ04656 1500 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTPRC-202ENST00000367364 MAP3K4Q9Y6R4 1608 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 GPR75-ASB3A0A0A6YYF3 556 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 VWA3AA6NCI4 1184 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 GOLGA6CA6NDK9 693 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 GOLGA6BA6NDN3 693 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 GOLGA6L9A6NEM1 432 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 PES1O00541 588 aaKnown RBP3.7□□□□□ -1.82
PTPRC-202ENST00000367364 EBAG9O00559 213 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 SOCS6O14544 535 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 RTL8CO15255 209 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 EIF3HO15372 352 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTPRC-202ENST00000367364 ASNA1O43681 348 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 STX6O43752 255 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 N4BP1O75113 896 aaKnown RBP3.7□□□□□ -1.82
PTPRC-202ENST00000367364 TFRCP02786 760 aaKnown RBP3.7□□□□□ -1.82
PTPRC-202ENST00000367364 PYGLP06737 847 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 GOLGA6DP0CG33 693 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 ARSAP15289 507 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 FERP16591 822 aa3.7□□□□□ -1.82
PTPRC-202ENST00000367364 NF2P35240 595 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms