RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ULK3Q6PHR2 472 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 FAM92BQ6ZTR7 304 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 SAPCD2Q86UD0 394 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 FAM71AQ8IYT1 594 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 GJD3Q8N144 294 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 FANCFQ9NPI8 374 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 EVLQ9UI08 416 aaPredicted RBP15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 RAI2Q9Y5P3 530 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 ZNF879B4DU55 563 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 CALCAP01258 141 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 CAP1Q01518 475 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 MED22Q15528 200 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 FAM153CQ494X1 144 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 DUSP28Q4G0W2 176 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 DHDDSQ86SQ9 333 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 SFRP1Q8N474 314 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 PLGRKTQ9HBL7 147 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 OSER1Q9NX31 292 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 CYP3A7-CYP3A51PA0A087WV96 503 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 RIIAD1A6NNX1 92 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 CYP3A7P24462 503 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 SLC25A3Q00325 362 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 ZMYND11Q15326 602 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 MEA1Q16626 185 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 AMIGO1Q86WK6 493 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 SLC22A17Q8WUG5 538 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 NXF3Q9H4D5 531 aaKnown RBP15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 GPN1Q9HCN4 374 aaPredicted RBP15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 PLK2Q9NYY3 685 aa15.64■□□□□ 0.09
NUCKS1-201ENST00000367142 ARHGEF33A8MVX0 844 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 STBD1O95210 358 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TACR2P21452 398 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 ZBTB6Q15916 424 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TLR10Q9BXR5 811 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TDRD1Q9BXT4 1180 aaKnown RBP15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CDH7Q9ULB5 785 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 PRMT5O14744 637 aaPredicted RBP15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 FAM153BP0C7A2 387 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 PRKCIP41743 596 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 BLKP51451 505 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 RTP1P59025 263 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 NT5DC1Q5TFE4 455 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 PGBD2Q6P3X8 592 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 OR2L5Q8NG80 312 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 MEGF6O75095 1541 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TPD52L2O43399 206 aaKnown RBP15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 UGT2B11O75310 529 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CCKBRP32239 447 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 ALDH3A2P51648 485 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 FAM110CQ1W6H9 321 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 BBS12Q6ZW61 710 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 KBTBD2Q8IY47 623 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TCF25Q9BQ70 676 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CERS4Q9HA82 394 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TAS2R14Q9NYV8 317 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TRAFD1O14545 582 aaPredicted RBP15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 PAPSS1O43252 624 aaPredicted RBP15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 UBXN2BQ14CS0 331 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 OTOP2Q7RTS6 562 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 PIGKQ92643 395 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TCF12Q99081 682 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 TRIM2Q9C040 744 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CDH19Q9H159 772 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 A0A1W2PRG6 482 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 MSI1O43347 362 aaKnown RBP15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 HNRNPLP14866 589 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■□□□□ 8.7
NUCKS1-201ENST00000367142 HTR7P34969 479 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 C12orf56Q8IXR9 622 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CD99L2Q8TCZ2 262 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 IRGQQ8WZA9 623 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 ASTN1O14525 1302 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CASZ1Q86V15 1759 aa15.63■□□□□ 0.09
NUCKS1-201ENST00000367142 CASKO14936 926 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 HOXA10P31260 410 aaPredicted RBP15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 SWI5Q1ZZU3 235 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 RBM18Q96H35 190 aaKnown RBP15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 LRTM1Q9HBL6 345 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 G3V2T6 193 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 BTN3A3O00478 584 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 CDH4P55283 916 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 EARS2Q5JPH6 523 aaKnown RBP15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 MED27Q6P2C8 311 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 NPAS4Q8IUM7 802 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.092e-9■■■■□ 23
NUCKS1-201ENST00000367142 TRMOQ9BU70 441 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 CALML5Q9NZT1 146 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 PCYOX1Q9UHG3 505 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 DHX15O43143 795 aaKnown RBP15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 PNLIPRP1P54315 467 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 PPP2R2DQ66LE6 453 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 SULT1C3Q6IMI6 304 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 HDDC3Q8N4P3 179 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 CKAP2Q8WWK9 683 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 NUDT4Q9NZJ9 180 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 PCDHGB5Q9Y5G0 923 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 DHRS12A0PJE2 317 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 C5orf60A6NFR6 353 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 RGS20O76081 388 aa15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 PKMP14618 531 aaKnown RBP15.62■□□□□ 0.09
NUCKS1-201ENST00000367142 GNPDA1P46926 289 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms