RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MT-CYBP00156 380 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ATP1A1P05023 1023 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 HGFP14210 728 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PECAM1P16284 738 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FECHP22830 423 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SLC5A2P31639 672 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CD68P34810 354 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ACTR1BP42025 376 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FASLGP48023 281 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TMPRSS3P57727 454 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 DCDC1P59894 354 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ACTR1AP61163 376 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 DYNLT1P63172 113 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CXADRP78310 365 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CFHR1Q03591 330 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CDK18Q07002 472 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 WASHC5Q12768 1159 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CLN3Q13286 438 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FOXR1Q6PIV2 292 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SPOCD1Q6ZMY3 1216 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CCDC170Q8IYT3 715 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KATNAL2Q8IYT4 538 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SFRP1Q8N474 314 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GPR26Q8NDV2 337 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SPATA22Q8NHS9 363 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CCHCR1Q8TD31 782 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CCDC97Q96F63 343 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GOLPH3Q9H4A6 298 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZFYVE1Q9HBF4 777 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CPNE5Q9HCH3 593 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PKD2L2Q9NZM6 624 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TFR2Q9UP52 801 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PCDHA13Q9Y5I0 950 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GCN1Q92616 2671 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 hCG_1818297A0A087WSY0 165 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 IGHV1OR21-1A0A087WYE8 117 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LOC285095A0A1B0GVY8 99 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 A6NCN8 305 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RHPN2P1A8MT19 583 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 EFSO43281 561 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SPOPO43791 374 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CST8O60676 142 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ETV5P41161 510 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TFDP2Q14188 446 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 C16orf72Q14CZ0 275 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 BROXQ5VW32 411 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 C11orf63Q6NUN7 778 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 BZW1Q7L1Q6 419 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PIM3Q86V86 326 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GALNT13Q8IUC8 556 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 B3GNT4Q9C0J1 378 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RMI1Q9H9A7 625 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RDH14Q9HBH5 336 aa13.55□□□□□ -0.24
TNFRSF1A-202ENST00000366159 IGHV5-10-1A0A0J9YXX1 117 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 K7ENP7 123 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CHUKO15111 745 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NUAK1O60285 661 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NDST3O95803 873 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PIRTP0C851 137 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TNNT1P13805 278 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ITIH1P19827 911 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ALDH4A1P30038 563 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 MARCKSL1P49006 195 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LIMK2P53671 638 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 INO80CQ6PI98 192 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KDELC1Q6UW63 502 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 USP53Q70EK8 1073 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CHST15Q7LFX5 561 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KDELC2Q7Z4H8 507 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RCOR2Q8IZ40 523 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TFB1MQ8WVM0 346 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PANX2Q96RD6 677 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CARD9Q9H257 536 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SEPT10Q9P0V9 454 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PDP2Q9P2J9 529 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ATXN10Q9UBB4 475 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TBC1D29Q9UFV1 150 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZNHIT2Q9UHR6 403 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZNF711Q9Y462 761 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PRKAB1Q9Y478 270 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SPO11Q9Y5K1 396 aa13.54□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RCCD1A6NED2 376 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PRR19A6NJB7 356 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 C9orf172C9J069 976 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 AURKAO14965 403 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 C1QL1O75973 258 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZRANB2O95218 330 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ASMTLO95671 621 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 EPOP01588 193 aa13.53□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZNF8P17098 575 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms