RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 VSIG1Q86XK7 387 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 FOXRED2Q8IWF2 684 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 BEST3Q8N1M1 668 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMEM199Q8N511 208 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 MCUQ8NE86 351 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 OR1J2Q8NGS2 313 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ADAMTS14Q8WXS8 1223 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 SLC25A28Q96A46 364 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZNF653Q96CK0 615 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 CCDC106Q9BWC9 280 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 EDEM3Q9BZQ6 932 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 RTN4RQ9BZR6 473 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMEM39BQ9GZU3 492 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 MMP27Q9H306 513 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMPRSS5Q9H3S3 457 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 CNGB3Q9NQW8 809 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 TRMT1Q9NXH9 659 aaKnown RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 BCCIPQ9P287 314 aaKnown RBP eCLIP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 PTGFRNQ9P2B2 879 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 CRNNQ9UBG3 495 aaPredicted RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZNF148Q9UQR1 794 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 PAM16Q9Y3D7 125 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMEM184BQ9Y519 407 aaPredicted RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 SQORQ9Y6N5 450 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZNF541Q9H0D2 1346 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMEM8BA6NDV4 472 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TSPY2A6NKD2 308 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 CCER2I3L3R5 266 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 ASAP2O43150 1006 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 RGS14O43566 566 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 HSPA4LO95757 839 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 EGFP01133 1207 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 GH2P01242 217 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 AFPP02771 609 aaKnown RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMEM191BP0C7N4 346 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TSPY3P0CV98 308 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TSPY8P0CW00 308 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 MYBL1P10243 752 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 STX2P32856 288 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 RFX2P48378 723 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZNF41P51814 821 aaPredicted RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 NUDT6P53370 316 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 CSNK2A1P68400 391 aaPredicted RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TMF1P82094 1093 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TSPY1Q01534 308 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 TWIST1Q15672 202 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 DECR1Q16698 335 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 CCDC184Q52MB2 194 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 FSCBQ5H9T9 825 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 DCST1Q5T197 706 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 NSUN5P2Q63ZY6 315 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 DHRS7BQ6IAN0 325 aaPredicted RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 KCTD18Q6PI47 426 aaPredicted RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 SLFN11Q7Z7L1 901 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZC3HC1Q86WB0 502 aaKnown RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 NRROSQ86YC3 692 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 DSELQ8IZU8 1212 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 MIGA1Q8NAN2 632 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 CSNK2A3Q8NEV1 391 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 GSDMBQ8TAX9 411 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 HM13Q8TCT9 377 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 ARSGQ96EG1 525 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 GRAMD2BQ96HH9 432 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 NLRP4Q96MN2 994 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 CDRT15Q96T59 188 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 SPRY4Q9C004 299 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 SPATC1LQ9H0A9 340 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 PPIL3Q9H2H8 161 aaKnown RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 KCNK15Q9H427 330 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 C17orf75Q9HAS0 396 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 SEBOXQ9HB31 216 aaPredicted RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 WDR35Q9P2L0 1181 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 STK39Q9UEW8 545 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 AMACRQ9UHK6 382 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 DBNLQ9UJU6 430 aaKnown RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 OSGIN1Q9UJX0 560 aa3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 NOL7Q9UMY1 257 aaKnown RBP3.74□□□□□ -1.81
RNU6-28P-201ENST00000362378 ATXN2Q99700 1313 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 RPS10-NUDT3A0A1W2PQS6 291 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 TRBC2A0A5B9 178 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 EIF4E1BA6NMX2 242 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 MAGEB17A8MXT2 336 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 SPINT2O43291 252 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 RSL1D1O76021 490 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 DDNO94850 711 aaPredicted RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 GGPS1O95749 300 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 SYF2O95926 243 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 RPN1P04843 607 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 SCG2P13521 617 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 HOXB2P14652 356 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 RPL3P39023 403 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 APOBEC1P41238 236 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 MXI1P50539 228 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 CCR3P51677 355 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 HNRNPH2P55795 449 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 SIRPAP78324 504 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 ROR2Q01974 943 aaKnown RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 FOXM1Q08050 763 aa3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 MAD2L1Q13257 205 aaPredicted RBP3.73□□□□□ -1.81
RNU6-28P-201ENST00000362378 IL11RAQ14626 422 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms