RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 INVSQ9Y283 1065 aa12.66□□□□□ -0.38
VAMP1-201ENST00000361716 SIPA1L1O43166 1804 aa12.66□□□□□ -0.38
VAMP1-201ENST00000361716 NUP205Q92621 2012 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 APOA1P02647 267 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 PRKACBP22694 351 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 TGM1P22735 817 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 BMPR1AP36894 532 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 FKBP1AP62942 108 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 NSUN2Q08J23 767 aaKnown RBP eCLIP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ZFP69Q49AA0 526 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CEP78Q5JTW2 689 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ZCCHC8Q6NZY4 707 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 PDZD4Q76G19 769 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ZDHHC13Q8IUH4 622 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ELMOD2Q8IZ81 293 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ADGRG5Q8IZF4 528 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CADM2Q8N3J6 435 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CELF2-AS1Q8N7Q2 184 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 QKIQ96PU8 341 aaKnown RBP eCLIP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 HOXD1Q9GZZ0 328 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ALG2Q9H553 416 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 TMEM181Q9P2C4 612 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 SATB2Q9UPW6 733 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 SOWAHBA6NEL2 793 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CENPXA8MT69 81 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ICMTO60725 284 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 SEC14L2O76054 403 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 TOMM70O94826 608 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CD4P01730 458 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 FTH1P02794 183 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 USP17L7P0C7H9 530 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 GFAPP14136 432 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CHRNA4P43681 627 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 GRM1Q13255 1194 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 TRIP4Q15650 581 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 FAAH2Q6GMR7 532 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ESRP1Q6NXG1 681 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 IQCF2Q8IXL9 164 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 UBE2J2Q8N2K1 259 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 AFG1LQ8WV93 481 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 NCLNQ969V3 563 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 ALG9Q9H6U8 611 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 EML4Q9HC35 981 aaKnown RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 CMTM6Q9NX76 183 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 PAQR5Q9NXK6 330 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-201ENST00000361716 SPEF1Q9Y4P9 236 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
VAMP1-201ENST00000361716 TTC24A2A3L6 582 aaPredicted RBP12.65□□□□□ -0.39
VAMP1-201ENST00000361716 PCP4L1A6NKN8 68 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 CRYZL1O95825 349 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 PIGRP01833 764 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 AHSGP02765 367 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 CD40LGP29965 261 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.39
VAMP1-201ENST00000361716 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.39
VAMP1-201ENST00000361716 GSK3BP49841 420 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 TAS2R39P59534 338 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 PLA2G4EQ3MJ16 856 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 STEAP4Q687X5 459 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 NEK10Q6ZWH5 1172 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 TTC30BQ8N4P2 665 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 REPS2Q8NFH8 660 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 NSMCE2Q96MF7 247 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 TDRD1Q9BXT4 1180 aaKnown RBP12.65□□□□□ -0.39
VAMP1-201ENST00000361716 RPRD1BQ9NQG5 326 aaKnown RBP12.65□□□□□ -0.39
VAMP1-201ENST00000361716 PLSCR3Q9NRY6 295 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.39
VAMP1-201ENST00000361716 CD300AQ9UGN4 299 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 STAP1Q9ULZ2 295 aa12.65□□□□□ -0.39
VAMP1-201ENST00000361716 TSC22D2O75157 780 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 PGLSO95336 258 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 SLC35E2BP0CK96 405 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 HGFP14210 728 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-201ENST00000361716 TKTL1P51854 596 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 XAF1Q6GPH4 301 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-201ENST00000361716 MIER2Q8N344 545 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 PACRGLQ8N7B6 248 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 BEST2Q8NFU1 509 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 MCOLN3Q8TDD5 553 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 C3orf30Q96M34 536 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 PPM1MQ96MI6 270 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 KCNA7Q96RP8 456 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 TBCDQ9BTW9 1192 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 NIFKQ9BYG3 293 aaKnown RBP12.64□□□□□ -0.39
VAMP1-201ENST00000361716 OSBPL2Q9H1P3 480 aa12.64□□□□□ -0.39
VAMP1-201ENST00000361716 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms