RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 THEGQ9P2T0 379 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 IKZF3Q9UKT9 509 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 TIMM22Q9Y584 194 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 SPO11Q9Y5K1 396 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 FAM92AA1XBS5 289 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 FAM149AA5PLN7 773 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 AQP12BA6NM10 295 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 H3BNH8 94 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 TMEM189-UBE2V1I3L0A0 370 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 PLOD2O00469 737 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 BTN3A1O00481 513 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 ARPC2O15144 300 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 HSD17B1P14061 328 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 ZNF23P17027 643 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 CDH2P19022 906 aaPredicted RBP8.55□□□□□ -1.04
RFX3-202ENST00000358730 SLC6A2P23975 617 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 OXTRP30559 389 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 MAGEA11P43364 429 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 ZNF140P52738 457 aaPredicted RBP8.55□□□□□ -1.04
RFX3-202ENST00000358730 YBX1P67809 324 aaKnown RBP8.55□□□□□ -1.04
RFX3-202ENST00000358730 NHSL2Q5HYW2 709 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 ANKS6Q68DC2 871 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 PPP4R4Q6NUP7 873 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 BORAQ6PGQ7 559 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 AFTPHQ6ULP2 937 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 ARHGAP22Q7Z5H3 698 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 IFNL1Q8IU54 200 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 AQP12AQ8IXF9 295 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 BBS5Q8N3I7 341 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 CBR4Q8N4T8 237 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 OR4K2Q8NGD2 314 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 ZUFSPQ96AP4 578 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 LRRC58Q96CX6 371 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 FAM193BQ96PV7 902 aaPredicted RBP8.55□□□□□ -1.04
RFX3-202ENST00000358730 TRIB3Q96RU7 358 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 GPR21Q99679 349 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 CINPQ9BW66 212 aaPredicted RBP8.55□□□□□ -1.04
RFX3-202ENST00000358730 MED16Q9Y2X0 877 aa8.55□□□□□ -1.04
RFX3-202ENST00000358730 CHD5Q8TDI0 1954 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 LCHNA4D1U4 455 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 SYCE1LA8MT33 242 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 H3BSA7 217 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 CDC7O00311 574 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 TLR5O60602 858 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 NDUFS3O75489 264 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 BAIAP3O94812 1187 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 TMCC1O94876 653 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 IL10P22301 178 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 HOXD9P28356 352 aaPredicted RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 PCSK6P29122 969 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 CRHR2Q13324 411 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 NFYCQ13952 458 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 TMEM259Q4ZIN3 620 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 FAM171A1Q5VUB5 890 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 LCN8Q6JVE9 175 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 IFNEQ86WN2 208 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 EPHX4Q8IUS5 362 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 GRIN3AQ8TCU5 1115 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 VPS33AQ96AX1 596 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 MGME1Q9BQP7 344 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 SPON2Q9BUD6 331 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 NLE1Q9NVX2 485 aaPredicted RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 IL37Q9NZH6 218 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 ACTR3BQ9P1U1 418 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 FNDC3AQ9Y2H6 1198 aaKnown RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 CEPT1Q9Y6K0 416 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 ZFC3H1O60293 1989 aaKnown RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 FAM155AB1AL88 458 aaPredicted RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 PDLIM1O00151 329 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 SYN3O14994 580 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 HNRNPRO43390 633 aaKnown RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 VPS4BO75351 444 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 CYBBP04839 570 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 RPS17P08708 135 aaKnown RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 PRDX3P30048 256 aaKnown RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 SLC5A2P31639 672 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 SOX11P35716 441 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 CASP2P42575 452 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 RGRP47804 291 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 AGTR2P50052 363 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 SCNN1BP51168 640 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 APLP1P51693 650 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 KCNQ1P51787 676 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 KCNK10P57789 538 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 BTG3Q14201 252 aaPredicted RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 GPR162Q16538 588 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 RBBP7Q16576 425 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 SETMARQ53H47 684 aaPredicted RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 SLC24A5Q71RS6 500 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 RTN4RL1Q86UN2 441 aaPredicted RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 DNAJB14Q8TBM8 379 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 LINC01599Q8WXQ3 324 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 FUBP1Q96AE4 644 aaKnown RBP8.54□□□□□ -1.04
RFX3-202ENST00000358730 ZNF599Q96NL3 588 aa8.54□□□□□ -1.04
RFX3-202ENST00000358730 TRIM54Q9BYV2 358 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms