RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RBM48Q5RL73 367 aaKnown RBP12.8□□□□□ -0.36
SMC4-202ENST00000357388 CUZD1Q86UP6 607 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 UNC93AQ86WB7 457 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 PRELID2Q8N945 189 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 OR10H5Q8NGA6 315 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 NPAS2Q99743 824 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 POLLQ9UGP5 575 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 EGFL7Q9UHF1 273 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 SLC28A2O43868 658 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 NOL4O94818 638 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 FGF19O95750 216 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 TRUB2O95900 331 aaKnown RBP12.8□□□□□ -0.36
SMC4-202ENST00000357388 ASGR1P07306 291 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 IL1R1P14778 569 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 MAMLD1Q13495 774 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 LLGL2Q6P1M3 1020 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 FOXR2Q6PJQ5 311 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 TMEM110Q86TL2 294 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ZBTB46Q86UZ6 589 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 IL1RAPQ9NPH3 570 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 MRPS33Q9Y291 106 aaKnown RBP12.8□□□□□ -0.36
SMC4-202ENST00000357388 BTRCQ9Y297 605 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 TET3O43151 1660 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 H6PDO95479 791 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ASMTP46597 345 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 DCDC1P59894 354 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.362e-14■■■■■ 48.8
SMC4-202ENST00000357388 NIPAL1Q6NVV3 410 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
SMC4-202ENST00000357388 RNF157Q96PX1 679 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ATP13A3Q9H7F0 1226 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ZNF639Q9UID6 485 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 PACSIN3Q9UKS6 424 aa12.8□□□□□ -0.36
SMC4-202ENST00000357388 ELOVL7A1L3X0 281 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PRAMEF1O95521 474 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 NELFEP18615 380 aaKnown RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 MAGEA12P43365 314 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 SNAPC1Q16533 368 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ADGRG2Q8IZP9 1017 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 SLC2A14Q8TDB8 520 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 NEK7Q8TDX7 302 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 UFD1Q92890 307 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 IRF2BPLQ9H1B7 796 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 MIR1-1HGQ9H1L0 117 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 MARK1Q9P0L2 795 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 CFL2Q9Y281 166 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 H3BNH8 94 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 TNFRSF11BO00300 401 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ZSCAN5DPP0CG00 497 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 MAGP20916 626 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 BUD31P41223 144 aaPredicted RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 QPCTQ16769 361 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 TMC8Q8IU68 726 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 DNAJB8Q8NHS0 232 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ELMO1Q92556 727 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ABCG4Q9H172 646 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ZFP14Q9HCL3 533 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 SLCO1B3Q9NPD5 702 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 MRTO4Q9UKD2 239 aaKnown RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 MSL3P1P0C860 447 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 ADGRE1Q14246 886 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 SATL1Q86VE3 508 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 TRNT1Q96Q11 434 aaKnown RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 TMEM168Q9H0V1 697 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PNPOQ9NVS9 261 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 RBMXL2O75526 392 aaKnown RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 CLPXO76031 633 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PDHA2P29803 388 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 CYP4F8P98187 520 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 CBLBQ13191 982 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 LDLRAP1Q5SW96 308 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 ANO7Q6IWH7 933 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 PHF13Q86YI8 300 aaPredicted RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 INO80EQ8NBZ0 244 aaPredicted RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 OR52K2Q8NGK3 314 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 LPGAT1Q92604 370 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.361e-147■■■■■ 345.5
SMC4-202ENST00000357388 CUEDC1Q9NWM3 386 aaPredicted RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 POLR3HQ9Y535 204 aaPredicted RBP12.79□□□□□ -0.36
SMC4-202ENST00000357388 NRCAMQ92823 1304 aa12.79□□□□□ -0.36
SMC4-202ENST00000357388 H7C2Y5 167 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 UGT2B4P06133 528 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 LINC00032P0C843 101 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GPD2P43304 727 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms