RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 FBXO48Q5FWF7 155 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 ZNF678Q5SXM1 525 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 USP43Q70EL4 1123 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 LDB1Q86U70 411 aaPredicted RBP18.82■□□□□ 0.6
PRPF39-201ENST00000355765 FAM83AQ86UY5 434 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 CNTN4Q8IWV2 1026 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 ABI1Q8IZP0 508 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 OR6Q1Q8NGQ2 317 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 DACH2Q96NX9 599 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 NSUN5Q96P11 429 aaKnown RBP18.82■□□□□ 0.6
PRPF39-201ENST00000355765 NODALQ96S42 347 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 FDXACB1Q9BRP7 624 aaPredicted RBP18.82■□□□□ 0.6
PRPF39-201ENST00000355765 TEX13BQ9BXU2 312 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 TRIT1Q9H3H1 467 aaKnown RBP18.82■□□□□ 0.6
PRPF39-201ENST00000355765 FAM118AQ9NWS6 357 aa18.82■□□□□ 0.6
PRPF39-201ENST00000355765 EIF2S1P05198 315 aaKnown RBP18.81■□□□□ 0.6
PRPF39-201ENST00000355765 NOMO2Q5JPE7 1267 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 GPR158Q5T848 1215 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 PAGE2Q7Z2X7 111 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 ATP6V0D2Q8N8Y2 350 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 LEMD2Q8NC56 503 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 BTN2A3PQ96KV6 586 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 TEKT5Q96M29 485 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 AMBRA1Q9C0C7 1298 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 IGKV6-21A0A0C4DH24 114 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 NUAK1O60285 661 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 CYP2C8P10632 490 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 ARF4P18085 180 aaPredicted RBP18.81■□□□□ 0.6
PRPF39-201ENST00000355765 IMPDH1P20839 514 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 DNAJB1P25685 340 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 MZF1P28698 734 aaPredicted RBP18.81■□□□□ 0.6
PRPF39-201ENST00000355765 MAP2K4P45985 399 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 POU4F1Q01851 419 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 DGUOKQ16854 277 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 NOL9Q5SY16 702 aaKnown RBP18.81■□□□□ 0.6
PRPF39-201ENST00000355765 LAIR2Q6ISS4 152 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 CLYBLQ8N0X4 340 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 BPIFB1Q8TDL5 484 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 TRIB2Q92519 343 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 TBL1YQ9BQ87 522 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 THG1LQ9NWX6 298 aaKnown RBP18.81■□□□□ 0.6
PRPF39-201ENST00000355765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.81■□□□□ 0.6
PRPF39-201ENST00000355765 AASSQ9UDR5 926 aa18.81■□□□□ 0.6
PRPF39-201ENST00000355765 ZNF99A8MXY4 864 aaPredicted RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 SEC24AO95486 1093 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 SPNP16150 400 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 COPZ1P61923 177 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 BLOC1S3Q6QNY0 202 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 PDZD4Q76G19 769 aaPredicted RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 C2CD4AQ8NCU7 369 aaPredicted RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 ITCHQ96J02 903 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 NSMCE2Q96MF7 247 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TUBB1Q9H4B7 451 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 PARVBQ9HBI1 364 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TRPV5Q9NQA5 729 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 ITM2CQ9NQX7 267 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 NRCAMQ92823 1304 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 AP3B1O00203 1094 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TBC1D4O60343 1298 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 PCMT1P22061 227 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 MTHFRP42898 656 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 ILF2Q12905 390 aaKnown RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 HIST2H2ACQ16777 129 aaPredicted RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 GLYATQ6IB77 296 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 CCDC81Q6ZN84 652 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 ARHGAP36Q6ZRI8 547 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TAS2R42Q7RTR8 314 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 PIM3Q86V86 326 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 PTRH1Q86Y79 214 aaKnown RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TTC39CQ8N584 583 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 PPHLN1Q8NEY8 458 aaKnown RBP18.8■□□□□ 0.6
PRPF39-201ENST00000355765 C12orf42Q96LP6 360 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 MBOAT4Q96T53 435 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 GMLQ99445 158 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TRIM54Q9BYV2 358 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 TRHDEQ9UKU6 1024 aa18.8■□□□□ 0.6
PRPF39-201ENST00000355765 ASNA1O43681 348 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SOAT2O75908 522 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 CDK14O94921 469 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 UMPSP11172 480 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 PLIN5Q00G26 463 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 HABP4Q5JVS0 413 aaKnown RBP18.79■□□□□ 0.6
PRPF39-201ENST00000355765 C14orf80Q86SX3 495 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SAPCD2Q86UD0 394 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 PHYKPLQ8IUZ5 450 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SULF1Q8IWU6 871 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 OR52K2Q8NGK3 314 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 FAM167AQ96KS9 214 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 POLG2Q9UHN1 485 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 A0A1B0GTL3 188 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SLC1A7O00341 560 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 CCL22O00626 93 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 WNT10BO00744 389 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 PMPCBO75439 489 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 KCNK2O95069 426 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 C1RP00736 705 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 MYL3P08590 195 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 RBP1P09455 135 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 ARPC4P59998 168 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 TNFAIP2Q03169 654 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms