RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 FDXRP22570 491 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 DBN1Q16643 649 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 CCDC153Q494R4 210 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 IER5LQ5T953 404 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 LIPIQ6XZB0 460 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 TBC1D1Q86TI0 1168 aaPredicted RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 KCTD4Q8WVF5 259 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 RAD18Q9NS91 495 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 FAM50BQ9Y247 325 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 AGAP14A8MT82 685 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 H0Y858 1186 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 PSMD11O00231 422 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 AREL1O15033 823 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 SPINT1O43278 529 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 PLIN3O60664 434 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 PROCP04070 461 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 PKMP14618 531 aaKnown RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 ACRV1P26436 265 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 ADARP55265 1226 aaKnown RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 DCDC1P59894 354 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 IRX4P78413 519 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 SATB1Q01826 763 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 TDGQ13569 410 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 ITGA9Q13797 1035 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 STARD3Q14849 445 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 CST6Q15828 149 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 Q6ZVL8 140 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 TRMT11Q7Z4G4 463 aaKnown RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 CCDC91Q7Z6B0 441 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 CENPLQ8N0S6 344 aaPredicted RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 IL17RCQ8NAC3 791 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 LRRC8CQ8TDW0 803 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 MSANTD3Q96H12 275 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 BIRC8Q96P09 236 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 GABRG3Q99928 467 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 HDAC8Q9BY41 377 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 FAM83DQ9H4H8 585 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 RABEP2Q9H5N1 569 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 POPDC3Q9HBV1 291 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 ATG2BQ96BY7 2078 aa13.54□□□□□ -0.24
HOXA1-202ENST00000355633 SPTBN5Q9NRC6 3674 aaKnown RBP13.54□□□□□ -0.24
HOXA1-202ENST00000355633 RGSL1A5PLK6 1076 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 TCP11X1B4DZS4 312 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 NEMP1O14524 444 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 PRMT5O14744 637 aaPredicted RBP13.53□□□□□ -0.24
HOXA1-202ENST00000355633 DNAJC6O75061 913 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 RHOBTB1O94844 696 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 ADH1BP00325 375 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 ESR1P03372 595 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 SRFP11831 508 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 NEFHP12036 1026 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 IL9P15248 144 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 CA5AP35218 305 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 ETV3P41162 512 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 P2RY2P41231 377 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 LIG3P49916 1009 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
HOXA1-202ENST00000355633 TSNAXIP1Q2TAA8 658 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 PUS10Q3MIT2 529 aaKnown RBP13.53□□□□□ -0.24
HOXA1-202ENST00000355633 ATP13A5Q4VNC0 1218 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 PIM3Q86V86 326 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 CACUL1Q86Y37 369 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 RBFAQ8N0V3 343 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 OR2T3Q8NH03 318 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 RAB7BQ96AH8 199 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
HOXA1-202ENST00000355633 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 CDH19Q9H159 772 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 P2RY12Q9H244 342 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 SLC2A4RGQ9NR83 387 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 TAS2R13Q9NYV9 303 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 NFKBIL1Q9UBC1 381 aaPredicted RBP13.53□□□□□ -0.24
HOXA1-202ENST00000355633 RUVBL2Q9Y230 463 aaKnown RBP13.53□□□□□ -0.24
HOXA1-202ENST00000355633 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 COMMD10Q9Y6G5 202 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 UNC80Q8N2C7 3258 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 PLXNA2O75051 1894 aa13.53□□□□□ -0.24
HOXA1-202ENST00000355633 MID1O15344 667 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 KLHL2O95198 593 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 KLF8O95600 359 aaPredicted RBP13.52□□□□□ -0.24
HOXA1-202ENST00000355633 HOXB2P14652 356 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 TAC1P20366 129 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 MRPS21P82921 87 aaKnown RBP13.52□□□□□ -0.24
HOXA1-202ENST00000355633 CNTN1Q12860 1018 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 ACOX1Q15067 660 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.24
HOXA1-202ENST00000355633 TECPR1Q7Z6L1 1165 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 TXNDC5Q8NBS9 432 aaKnown RBP13.52□□□□□ -0.24
HOXA1-202ENST00000355633 BCAS4Q8TDM0 211 aa13.52□□□□□ -0.24
HOXA1-202ENST00000355633 FAM3CQ92520 227 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms