RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZC3H18Q86VM9 953 aaKnown RBP15.72■□□□□ 0.11
DDX55-202ENST00000354291 PHF13Q86YI8 300 aaPredicted RBP15.72■□□□□ 0.11
DDX55-202ENST00000354291 PLXDC1Q8IUK5 500 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 Q8NA96 180 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 C3orf20Q8ND61 904 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 JOSD2Q8TAC2 188 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 CENPIQ92674 756 aaPredicted RBP15.72■□□□□ 0.11
DDX55-202ENST00000354291 SH3KBP1Q96B97 665 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 TBC1D10AQ9BXI6 508 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 NAT10Q9H0A0 1025 aaKnown RBP15.72■□□□□ 0.11
DDX55-202ENST00000354291 ING2Q9H160 280 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 ACTL8Q9H568 366 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 MLXIPLQ9NP71 852 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 PDZD2O15018 2839 aa15.72■□□□□ 0.11
DDX55-202ENST00000354291 ANKRD62A6NC57 917 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 SIGLEC16A6NMB1 481 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 DPM1O60762 260 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 CBX6O95503 412 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 NFKBIAP25963 317 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 RFC1P35251 1148 aaPredicted RBP15.71■□□□□ 0.11
DDX55-202ENST00000354291 GARSP41250 739 aaKnown RBP15.71■□□□□ 0.11
DDX55-202ENST00000354291 GPR1P46091 355 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 SCNN1BP51168 640 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 GFERP55789 205 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 PYCR3Q53H96 274 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 Q6ZVL8 140 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 HSD11B1LQ7Z5J1 315 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 SLFN11Q7Z7L1 901 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 TRIM74Q86UV6 250 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 GALNT13Q8IUC8 556 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 FAM172AQ8WUF8 416 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 THAP4Q8WY91 577 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 DTD2Q96FN9 168 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 CELF6Q96J87 481 aaKnown RBP15.71■□□□□ 0.11
DDX55-202ENST00000354291 RUFY1Q96T51 708 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 AGPAT1Q99943 283 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 PDFQ9HBH1 243 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 SARS2Q9NP81 518 aaKnown RBP15.71■□□□□ 0.11
DDX55-202ENST00000354291 LHX9Q9NQ69 397 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 SEPT11Q9NVA2 429 aaKnown RBP15.71■□□□□ 0.11
DDX55-202ENST00000354291 KCTD5Q9NXV2 234 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 ZNHIT2Q9UHR6 403 aa15.71■□□□□ 0.11
DDX55-202ENST00000354291 HIVEP1P15822 2718 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 NF1P21359 2839 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 SNX2O60749 519 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 PRAMEF11O60813 436 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 SPAG6O75602 509 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 HEXIM1O94992 359 aaKnown RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 GPD1P21695 349 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 VIPR1P32241 457 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 HDAC4P56524 1084 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 RPS18P62269 152 aaKnown RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 IL11RAQ14626 422 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 CHRNA6Q15825 494 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 ZRANB3Q5FWF4 1079 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 SCYL2Q6P3W7 929 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 IYDQ6PHW0 289 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 WDR59Q6PJI9 974 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 APTXQ7Z2E3 356 aaKnown RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 SLC9B2Q86UD5 537 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 UMODL1-AS1Q8N2C9 162 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 NTAN1Q96AB6 310 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 SCARF2Q96GP6 870 aaPredicted RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 C9orf72Q96LT7 481 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 TGM7Q96PF1 710 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 CINPQ9BW66 212 aaPredicted RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 UNKQ9C0B0 810 aaKnown RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 CNOT8Q9UFF9 292 aaKnown RBP15.7■□□□□ 0.1
DDX55-202ENST00000354291 TBC1D29Q9UFV1 150 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 PRKAB1Q9Y478 270 aa15.7■□□□□ 0.1
DDX55-202ENST00000354291 TTC24A2A3L6 582 aaPredicted RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 ANKUB1A6NFN9 424 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 WASH4PA8MWX3 477 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 C21orf140B9A014 251 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 TRAFD1O14545 582 aaPredicted RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 ASMTLO95671 621 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 MT-ND3P03897 115 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 FERP16591 822 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 TYRP1P17643 537 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 DESP17661 470 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 PAPOLAP51003 745 aaKnown RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 NDST2P52849 883 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 EPHA4P54764 986 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 TYRO3Q06418 890 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 ELOAQ14241 798 aaKnown RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 UGT8Q16880 541 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 PAPD7Q5XG87 772 aaKnown RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 SLC6A19Q695T7 634 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 FAM199XQ6PEV8 388 aaPredicted RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 MON1BQ7L1V2 547 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 CHST15Q7LFX5 561 aaPredicted RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 CISD2Q8N5K1 135 aaKnown RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 LZTR1Q8N653 840 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 AOPEPQ8N6M6 819 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 SNRNP40Q96DI7 357 aaKnown RBP15.69■□□□□ 0.1
DDX55-202ENST00000354291 NSMCE3Q96MG7 304 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 HSD3B7Q9H2F3 369 aa15.69■□□□□ 0.1
DDX55-202ENST00000354291 CD84Q9UIB8 345 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms