RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 ALG2Q9H553 416 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 LIN28AQ9H9Z2 209 aaKnown RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 TAS2R13Q9NYV9 303 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 OAZ3Q9UMX2 235 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 SYCE1LA8MT33 242 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 TBX18O95935 607 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 SERPINF2P08697 491 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 MYF6P23409 242 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 DIO3P55073 304 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 TNK2Q07912 1038 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 TRIP4Q15650 581 aaPredicted RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 NFE2Q16621 373 aaPredicted RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 C10orf120Q5SQS8 335 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 TMTC4Q5T4D3 741 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 CLVS1Q8IUQ0 354 aaPredicted RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 ADGRG5Q8IZF4 528 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 GFM2Q969S9 779 aaKnown RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 INTS10Q9NVR2 710 aaKnown RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 GALNT8Q9NY28 637 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 TUBA8Q9NY65 449 aaPredicted RBP12.07□□□□□ -0.48
DDX4-201ENST00000353507 TIMM22Q9Y584 194 aa12.07□□□□□ -0.48
DDX4-201ENST00000353507 A0A1W2PP18 115 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 NCF1BA6NI72 391 aaPredicted RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 NCF1CA8MVU1 366 aaPredicted RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 PFDN1O60925 122 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 CYBBP04839 570 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 RPLP2P05387 115 aaKnown RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 PRSS56P0CW18 603 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 MTHFD1P11586 935 aaKnown RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 NCF1P14598 390 aaPredicted RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 FMO4P31512 558 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 GSK3BP49841 420 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 FKBP1BP68106 108 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 TSNQ15631 228 aaKnown RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 ATP6AP1Q15904 470 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 RBBP7Q16576 425 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 FUT11Q495W5 492 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 SPATS1Q496A3 300 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 PAQR3Q6TCH7 311 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 EFL1Q7Z2Z2 1120 aaKnown RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 SPATA19Q7Z5L4 167 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 CMTR2Q8IYT2 770 aaKnown RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 BBS5Q8N3I7 341 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 C2orf69Q8N8R5 385 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 GPR152Q8TDT2 470 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 SEPT8Q92599 483 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 FBXO32Q969P5 355 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 VPS33AQ96AX1 596 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 DERL2Q9GZP9 239 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 SPC25Q9HBM1 224 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 MARCH2Q9P0N8 246 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 SUN2Q9UH99 717 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 CIDEBQ9UHD4 219 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 PTBP2Q9UKA9 531 aaKnown RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 SLC12A8A0AV02 714 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 MUSKO15146 869 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 NDUFS3O75489 264 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 ECI2O75521 394 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 SOX11P35716 441 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 CCT8P50990 548 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 YBEYP58557 167 aaPredicted RBP12.06□□□□□ -0.48
DDX4-201ENST00000353507 ECT2LQ008S8 904 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 TYSND1Q2T9J0 566 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 RABL3Q5HYI8 236 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 TRPV3Q8NET8 790 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 RNF217Q8TC41 542 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 TMEM125Q96AQ2 219 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 CDKN2AIPNLQ96HQ2 116 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 FUBP3Q96I24 572 aaKnown RBP eCLIP12.06□□□□□ -0.48
DDX4-201ENST00000353507 C8orf48Q96LL4 319 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 PFDN4Q9NQP4 134 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 C8orf4Q9NR00 106 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 ANAPC2Q9UJX6 822 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 PCDHA9Q9Y5H5 950 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 GPR45Q9Y5Y3 372 aa12.06□□□□□ -0.48
DDX4-201ENST00000353507 NPEPPSL1A6NEC2 478 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 CCDC154A6NI56 674 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 EI24O14681 340 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 CLOCKO15516 846 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 SNX2O60749 519 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 PRAMEF11O60813 436 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 SOAT2O75908 522 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 NDST3O95803 873 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 EPOP01588 193 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 ADARP55265 1226 aaKnown RBP12.05□□□□□ -0.48
DDX4-201ENST00000353507 LIPEQ05469 1076 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 DSC3Q14574 896 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 AASDHQ4L235 1098 aaPredicted RBP12.05□□□□□ -0.48
DDX4-201ENST00000353507 OGFOD2Q6N063 350 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 TSPEARQ8WU66 669 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 RMDN1Q96DB5 314 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 CYP2S1Q96SQ9 504 aa12.05□□□□□ -0.48
DDX4-201ENST00000353507 NUSAP1Q9BXS6 441 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms