RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GALNT13Q8IUC8 556 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 PYDC1Q8WXC3 89 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 ERVW-1Q9UQF0 538 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 CXorf49A8MYA2 514 aaPredicted RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 ZBTB42B2RXF5 422 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 IPO13O94829 963 aaKnown RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 TIGD2Q4W5G0 525 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 MSANTD2Q6P1R3 559 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 NAT8LQ8N9F0 302 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 TIFAQ96CG3 184 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 RAB23Q9ULC3 237 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 POLR3HQ9Y535 204 aaPredicted RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 CITO14578 2027 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 NIPSNAP2O75323 286 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 FGFR3P22607 806 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 KRT20P35900 424 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 DGKEP52429 567 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 MSS51Q4VC12 460 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 ZBTB49Q6ZSB9 765 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 HEXDCQ8WVB3 486 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 PRKAG3Q9UGI9 489 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 CLDN7O95471 211 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 ME2P23368 584 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 STK19P49842 368 aaPredicted RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 IRF9Q00978 393 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 ILF2Q12905 390 aaKnown RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 MAPKAPK3Q16644 382 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 CLYBLQ8N0X4 340 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 TMEM132CQ8N3T6 1108 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 CLDN19Q8N6F1 224 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 NOL11Q9H8H0 719 aaKnown RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 FAM163BP0C2L3 166 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 CRHR1P34998 444 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 MAGEA11P43364 429 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 ARL13AQ5H913 290 aaPredicted RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 HLA-DQA1Q5Y7H0 255 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 TTC33Q6PID6 262 aaPredicted RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 CERS6Q6ZMG9 384 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 TP53INP2Q8IXH6 220 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 CACNA1SQ13698 1873 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 VPS4BO75351 444 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 KELP23276 732 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 KLC1Q07866 573 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 OR2AP1Q8NGE2 309 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 PTCD2Q8WV60 388 aaKnown RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 CLP1Q92989 425 aaKnown RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 RCN3Q96D15 328 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 SQORQ9Y6N5 450 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 MYH7P12883 1935 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 VAV1P15498 845 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 IDSP22304 550 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 KPNB1Q14974 876 aaKnown RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 ATAD3BQ5T9A4 648 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 ICE2Q659A1 982 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 GDPD4Q6W3E5 623 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 C17orf64Q86WR6 236 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 IGSF8Q969P0 613 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 ROGDIQ9GZN7 287 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 STK16O75716 305 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 VIPP01282 170 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 RPS7P62081 194 aaKnown RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 TAF1AQ15573 450 aaPredicted RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 FGD3Q5JSP0 725 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 WLSQ5T9L3 541 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 TMEM154Q6P9G4 183 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 FSTL5Q8N475 847 aaPredicted RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 DEFB119Q8N690 84 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 TSC22D3Q99576 134 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 RIOK2Q9BVS4 552 aaKnown RBP13.63□□□□□ -0.23
SMC6-201ENST00000351948 ABCG4Q9H172 646 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 CXCL16Q9H2A7 254 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 IPPKQ9H8X2 491 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 SGK2Q9HBY8 427 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 ZDHHC18Q9NUE0 388 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 COMMD8Q9NX08 183 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 OSER1Q9NX31 292 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 RPS6KB2Q9UBS0 482 aa13.63□□□□□ -0.23
SMC6-201ENST00000351948 EPN2O95208 641 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 CXCR2P25025 360 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 CDH5P33151 784 aaPredicted RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 IZUMO2Q6UXV1 221 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 UTP15Q8TED0 518 aaKnown RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 SORCS1Q8WY21 1168 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 RERGQ96A58 199 aaPredicted RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 NKX2-4Q9H2Z4 354 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 EIF2B4Q9UI10 523 aaKnown RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 PRR5-ARHGAP8B1AHC4 643 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 BIRC5O15392 142 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms