RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FNDC3AQ9Y2H6 1198 aaKnown RBP11.77□□□□□ -0.53
SNCA-202ENST00000345009 OR1A2Q9Y585 309 aa11.77□□□□□ -0.53
SNCA-202ENST00000345009 NEMP2A6NFY4 417 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 MROH6A6NGR9 719 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 GPR89AB7ZAQ6 455 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 K7ESM1 405 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 LDB2O43679 373 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 ZNF500O60304 480 aaPredicted RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 SLC25A14O95258 325 aaPredicted RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 GPR89BP0CG08 455 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 DEKP35659 375 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 GRIA1P42261 906 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 CCT8P50990 548 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 CDK3Q00526 305 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 MSLNQ13421 630 aaPredicted RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 DNAJC21Q5F1R6 531 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 CERCAMQ5T4B2 595 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 IZUMO3Q5VZ72 239 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 C8orf74Q6P047 294 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 ENPP7Q6UWV6 458 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 LAYNQ6UX15 382 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 ALYREFQ86V81 257 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 PHYKPLQ8IUZ5 450 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 PDIK1LQ8N165 341 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 GPR26Q8NDV2 337 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 OR56A4Q8NGH8 313 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 ZNF398Q8TD17 642 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNCA-202ENST00000345009 FUBP1Q96AE4 644 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 EID2BQ96D98 161 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 REPIN1Q9BWE0 567 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 ZCCHC2Q9C0B9 1178 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 GPR27Q9NS67 375 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 NLE1Q9NVX2 485 aaPredicted RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 KLQ9UEF7 1012 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 ANAPC5Q9UJX4 755 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 PCDHGB2Q9Y5G2 931 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.76□□□□□ -0.53
SNCA-202ENST00000345009 SLC30A1Q9Y6M5 507 aa11.76□□□□□ -0.53
SNCA-202ENST00000345009 CEP250Q9BV73 2442 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 TNRC6BQ9UPQ9 1833 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 A0A1B0GTQ1 180 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 GOLGA8MH3BSY2 632 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 BUD23O43709 281 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 RASGRP1O95267 797 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 ASMTLO95671 621 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 TNFP01375 233 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 CSF2P04141 144 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 RALBP11234 206 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 CTSEP14091 401 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 JUNDP17535 347 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 PAMP19021 973 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 ITGALP20701 1170 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 PPARGP37231 505 aaPredicted RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 ZNF140P52738 457 aaPredicted RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 LIMK1P53667 647 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 SRP54P61011 504 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 PRAMEP78395 509 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 CAV1Q03135 178 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 PEX6Q13608 980 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 FZD2Q14332 565 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 UAP1L1Q3KQV9 507 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 GPR33Q49SQ1 333 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 GLE1Q53GS7 698 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 LDLRAP1Q5SW96 308 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 RNASEH2BQ5TBB1 312 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 STPG1Q5TH74 334 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 FAM151BQ6UXP7 276 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 RD3Q7Z3Z2 195 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 SPATS2Q86XZ4 545 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 HID1Q8IV36 788 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 SLC22A18ASQ8N1D0 253 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 SDR16C5Q8N3Y7 309 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 NAT8LQ8N9F0 302 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 NETO1Q8TDF5 533 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 HEXDCQ8WVB3 486 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 GLYATL1Q969I3 302 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 ULK4Q96C45 1275 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 VPS35Q96QK1 796 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 NAT9Q9BTE0 207 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 TRIM31Q9BZY9 425 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 RMI1Q9H9A7 625 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 TRIM39Q9HCM9 518 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 FSCN3Q9NQT6 498 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 TM7SF3Q9NS93 570 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 DNAAF2Q9NVR5 837 aaKnown RBP11.75□□□□□ -0.53
SNCA-202ENST00000345009 WHRNQ9P202 907 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 VPS18Q9P253 973 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 SPASTQ9UBP0 616 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 MOSPD1Q9UJG1 213 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 TCAF1Q9Y4C2 921 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 DGKBQ9Y6T7 804 aa11.75□□□□□ -0.53
SNCA-202ENST00000345009 LRRK1Q38SD2 2015 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 TCRBV7S3A2A0A539 114 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms