RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TYRP14679 529 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ASPAP45381 313 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 STT3AP46977 705 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 GABRB2P47870 512 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 MAPKAPK2P49137 400 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 DRG2P55039 364 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 C21orf59P57076 290 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 AP2B1P63010 937 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 BASP1P80723 227 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 SIM1P81133 766 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CYP4F8P98187 520 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 DR1Q01658 176 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 BST2Q10589 180 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 SLC29A2Q14542 456 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 SF3B4Q15427 424 aaKnown RBP eCLIP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PCSK7Q16549 785 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF829Q3KNS6 432 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 TAF1BQ53T94 588 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF658Q5TYW1 1059 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 RRAGBQ5VZM2 374 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 NXNQ6DKJ4 435 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PPP1R21Q6ZMI0 780 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ATG14Q6ZNE5 492 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 USP43Q70EL4 1123 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ARPINQ7Z6K5 226 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ADIPOR2Q86V24 386 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 RASGEF1CQ8N431 466 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 ANGPTL6Q8NI99 470 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CALML6Q8TD86 181 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PEX13Q92968 403 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 TMA16Q96EY4 203 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 CNDP2Q96KP4 475 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 LRFN5Q96NI6 719 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 HHIPQ96QV1 700 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 BARD1Q99728 777 aaKnown RBP7.32□□□□□ -1.24
ZNF540-202ENST00000343599 PSD2Q9BQI7 771 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 AGPAT3Q9NRZ7 376 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 THAP1Q9NVV9 213 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 HSPBP1Q9NZL4 362 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 KCNJ14Q9UNX9 436 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 IKBKGQ9Y6K9 419 aa7.32□□□□□ -1.24
ZNF540-202ENST00000343599 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 BTNL10A8MVZ5 291 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF487B1APH4 448 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PGRMC1O00264 195 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 DENRO43583 198 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 BUB1O43683 1085 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TMCC2O75069 709 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CEACAM4O75871 244 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 FTCDO95954 541 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MT-CO3P00414 261 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 F9P00740 461 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MT-ND3P03897 115 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CSF2P04141 144 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 M6PRP20645 277 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TNFAIP3P21580 790 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MAP4P27816 1152 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ATP5DP30049 168 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 POLR2BP30876 1174 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 STX2P32856 288 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SLC11A2P49281 568 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ST13P50502 369 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SLC5A3P53794 718 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 INSM1Q01101 510 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CHRNEQ04844 493 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 THOC5Q13769 683 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NR0B2Q15466 257 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KNOP1Q1ED39 458 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF667Q5HYK9 610 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 DUPD1Q68J44 220 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KMT5CQ86Y97 462 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SLC38A6Q8IZM9 456 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZSCAN1Q8NBB4 408 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 FUBP1Q96AE4 644 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SIPA1Q96FS4 1042 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 STRADBQ9C0K7 418 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KCTD10Q9H3F6 313 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PRSS16Q9NQE7 514 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 RAD18Q9NS91 495 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 IL20Q9NYY1 176 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MTRF1LQ9UGC7 380 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 RSL24D1Q9UHA3 163 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CDH22Q9UJ99 828 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NOSIPQ9Y314 301 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PCDHGA10Q9Y5H3 936 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TMEM150BA6NC51 233 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CCDC160A6NGH7 325 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 OTOL1A6NHN0 477 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KCNU1A8MYU2 1149 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KLF4O43474 513 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ITM2AO43736 263 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SYNCRIPO60506 623 aaKnown RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ESRRBO95718 433 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PRNPP04156 253 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MBL2P11226 248 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CCNCP24863 283 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 HOXD9P28356 352 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 FOXN2P32314 431 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CETN2P41208 172 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 HNRNPKP61978 463 aaKnown RBP eCLIP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms