RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 EMX2Q04743 252 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 GEN1Q17RS7 908 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 CTU2Q2VPK5 515 aaKnown RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 DCAF4L1Q3SXM0 396 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ZIK1Q3SY52 487 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF789Q5FWF6 425 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 HECTD2Q5U5R9 776 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 SPATA19Q7Z5L4 167 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 DSG4Q86SJ6 1040 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ISCA2Q86U28 154 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 SPATA22Q8NHS9 363 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 CALML6Q8TD86 181 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 PPP1R2P1Q96PQ5 205 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 IL12RB2Q99665 862 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 FICDQ9BVA6 458 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 DUSP16Q9BY84 665 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 CXCL16Q9H2A7 254 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 TOR3AQ9H497 397 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 EHD1Q9H4M9 534 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 MOV10Q9HCE1 1003 aaKnown RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 AIG1Q9NVV5 245 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 POLR3BQ9NW08 1133 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 FAM118AQ9NWS6 357 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 COX16Q9P0S2 106 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 GIMAP2Q9UG22 337 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 POU2F3Q9UKI9 436 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 PMF1-BGLAPU3KQ54 211 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NUP205Q92621 2012 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 C9JVG2 144 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NUAK1O60285 661 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 HUS1O60921 280 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NDUFS2O75306 463 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NDST3O95803 873 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 MT-ND1P03886 318 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 RAP2AP10114 183 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 LMO2P25791 158 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 KCNC1P48547 511 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 GEMP55040 296 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 TPTEP56180 551 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 IFITM2Q01629 132 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 HIST2H2ACQ16777 129 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 PAGE3Q5JUK9 113 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 OTUD3Q5T2D3 398 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 KIAA0319Q5VV43 1072 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 C9orf57Q5W0N0 161 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 TMEM207Q6UWW9 146 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 PRR23BQ6ZRT6 265 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 HFE2Q6ZVN8 426 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NANOGNBQ7Z5D8 188 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 RNF135Q8IUD6 432 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 TMEM199Q8N511 208 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 BEST2Q8NFU1 509 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF419Q96HQ0 510 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 RPL10LQ96L21 214 aaKnown RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NSMCE2Q96MF7 247 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 TRIM8Q9BZR9 551 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 BRINP2Q9C0B6 783 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 HOXD1Q9GZZ0 328 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ADNPQ9H2P0 1102 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 SIAEQ9HAT2 523 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 GLOD4Q9HC38 313 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ANKHQ9HCJ1 492 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ENTPD7Q9NQZ7 604 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 LEF1Q9UJU2 399 aaPredicted RBP9.62□□□□□ -0.87
HOXA1-201ENST00000343060 NOX1Q9Y5S8 564 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 PTGDR2Q9Y5Y4 395 aa9.62□□□□□ -0.87
HOXA1-201ENST00000343060 ISPDA4D126 451 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF99A8MXY4 864 aaPredicted RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 TTC34A8MYJ7 566 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SLC1A7O00341 560 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SOCS7O14512 581 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 XYLBO75191 536 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 INMTO95050 263 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 CHRNA1P02708 482 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 CCDC159P0C7I6 412 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 TSPAN8P19075 237 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 CD40LGP29965 261 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 EIF2DP41214 584 aaKnown RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SERPINB10P48595 397 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 PPP2R2BQ00005 443 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 CD47Q08722 323 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 DNASE1L3Q13609 305 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 DGUOKQ16854 277 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 PGS1Q32NB8 556 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 RIOX2Q8IUF8 465 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 ARMC8Q8IUR7 673 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 MMAAQ8IVH4 418 aaKnown RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SPNS2Q8IVW8 549 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 ZCCHC7Q8N3Z6 543 aaKnown RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 IPMKQ8NFU5 416 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 OR13J1Q8NGT2 312 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 DNAJB14Q8TBM8 379 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 FAR1Q8WVX9 515 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 YIPF6Q96EC8 236 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 RNF145Q96MT1 663 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms