RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 TSSK4Q6SA08 328 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 SDCCAG8Q86SQ7 713 aaPredicted RBP20.53■□□□□ 0.88
SNX21-201ENST00000342644 FRMD1Q8N878 549 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 TP53I13Q8NBR0 393 aaPredicted RBP20.53■□□□□ 0.88
SNX21-201ENST00000342644 C2CD4AQ8NCU7 369 aaPredicted RBP20.53■□□□□ 0.88
SNX21-201ENST00000342644 UHMK1Q8TAS1 419 aaKnown RBP20.53■□□□□ 0.88
SNX21-201ENST00000342644 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX21-201ENST00000342644 CENPTQ96BT3 561 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 ULK4Q96C45 1275 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 VPS35Q96QK1 796 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 AGAP2Q99490 1192 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 TMEM109Q9BVC6 243 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 SPATA16Q9BXB7 569 aa20.53■□□□□ 0.88
SNX21-201ENST00000342644 C6orf106Q9H6K1 298 aaPredicted RBP20.53■□□□□ 0.88
SNX21-201ENST00000342644 EXOC1LA0A1B0GW35 172 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 CXorf49A8MYA2 514 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 HMGB1P1B2RPK0 211 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 SHBGP04278 402 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 IGHV4-34P06331 123 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 TTPAP49638 278 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 LRRC14Q15048 493 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 ZRANB3Q5FWF4 1079 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 ZNF470Q6ECI4 717 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 PSAPL1Q6NUJ1 521 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 PIANPQ8IYJ0 282 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 CNPY4Q8N129 248 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 FAM160A2Q8N612 972 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 OR2W6PQ8NHA6 318 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 NELL1Q92832 810 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 KLF6Q99612 283 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 COL25A1Q9BXS0 654 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 ROPN1BQ9BZX4 212 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 ROPN1Q9HAT0 212 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 MARCH4Q9P2E8 410 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 SLC24A2Q9UI40 661 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 MBD1Q9UIS9 605 aaPredicted RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 FBXO5Q9UKT4 447 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 DMTF1Q9Y222 760 aa20.52■□□□□ 0.87
SNX21-201ENST00000342644 FNDC3AQ9Y2H6 1198 aaKnown RBP20.52■□□□□ 0.87
SNX21-201ENST00000342644 GOLGA8CPA6NN73 597 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 NDUFS2O75306 463 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 SOD1P00441 154 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 PPARGP37231 505 aaPredicted RBP20.51■□□□□ 0.87
SNX21-201ENST00000342644 SLC1A2P43004 574 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 LEPRP48357 1165 aaKnown RBP20.51■□□□□ 0.87
SNX21-201ENST00000342644 CSTF1Q05048 431 aaKnown RBP20.51■□□□□ 0.87
SNX21-201ENST00000342644 ILF2Q12905 390 aaKnown RBP20.51■□□□□ 0.87
SNX21-201ENST00000342644 RASA2Q15283 850 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 ZNF528Q3MIS6 628 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 DENND6AQ8IWF6 608 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 CTAGE3PQ8IX95 158 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 SLC44A1Q8WWI5 657 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 TTC1Q99614 292 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 CPNE1Q99829 537 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 DHRS4Q9BTZ2 278 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 STMN4Q9H169 189 aaPredicted RBP20.51■□□□□ 0.87
SNX21-201ENST00000342644 C11orf16Q9NQ32 467 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 INTS10Q9NVR2 710 aaKnown RBP20.51■□□□□ 0.87
SNX21-201ENST00000342644 VPS9D1Q9Y2B5 631 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 BPTFQ12830 3046 aa20.51■□□□□ 0.87
SNX21-201ENST00000342644 FADS2P1A8MWK0 482 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 PFDN6O15212 129 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 POLR3GO15318 223 aaPredicted RBP20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A9O60656 530 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 GPR37L1O60883 481 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A6P19224 532 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A1P22309 533 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A4P22310 534 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 MAT2AP31153 395 aaKnown RBP20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A3P35503 534 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A5P35504 534 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 TRIM23P36406 574 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 GPR1P46091 355 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 FNTBP49356 437 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 CDKN1CP49918 316 aaPredicted RBP20.5■□□□□ 0.87
SNX21-201ENST00000342644 NUBP1P53384 320 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 CTBP1Q13363 440 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 SEMA3AQ14563 771 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 RNF187Q5TA31 235 aaPredicted RBP20.5■□□□□ 0.87
SNX21-201ENST00000342644 PNCKQ6P2M8 343 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 ADAMTSL4Q6UY14 1074 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 C11orf74Q86VG3 221 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 TDRPQ86YL5 185 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 NXPE1Q8N323 547 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 PPM1NQ8N819 430 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 BTN2A2Q8WVV5 523 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 ZBTB9Q96C00 473 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 BIRC7Q96CA5 298 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 MCMBPQ9BTE3 642 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 CENPHQ9H3R5 247 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A7Q9HAW7 530 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A10Q9HAW8 530 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 UGT1A8Q9HAW9 530 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 TMBIM4Q9HC24 238 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 CRLS1Q9UJA2 301 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 TMPRSS11EQ9UL52 423 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.5■□□□□ 0.87
SNX21-201ENST00000342644 PLXNB3Q9ULL4 1909 aa20.5■□□□□ 0.87
SNX21-201ENST00000342644 METTL12A8MUP2 240 aa20.49■□□□□ 0.87
SNX21-201ENST00000342644 PRR33A8MZF0 331 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms