RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 EXD2Q9NVH0 621 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ACOT9Q9Y305 439 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 AKAP6Q13023 2319 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CPED1A4D0V7 1026 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CCL16O15467 120 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ORC5O43913 435 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CSDE1O75534 798 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GJA1P17302 382 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TARSP26639 723 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RBL1P28749 1068 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CPA2P48052 419 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 BEX3Q00994 111 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SLC34A1Q06495 639 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 FOXC1Q12948 553 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 C16orf46Q6P387 395 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 METTL7BQ6UX53 244 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CERS6Q6ZMG9 384 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ADCY4Q8NFM4 1077 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CIDECQ96AQ7 238 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ISOC1Q96CN7 298 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 EGFL8Q99944 293 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZPBPQ9BS86 351 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SPANXA1Q9NS26 97 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TAS2R13Q9NYV9 303 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHA7Q9UN72 937 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 MTMR6Q9Y217 621 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 COL1A2P08123 1366 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 HEATR9A2RTY3 570 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 LRIG2O94898 1065 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 IFNA10P01566 189 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 IFNA4P05014 189 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 CYP2D6P10635 497 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF7P17097 686 aaPredicted RBP3.28□□□□□ -1.89
CSMD3-202ENST00000339701 CYP2A7P20853 494 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 SDC2P34741 201 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 SLC26A3P40879 764 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 KCNJ5P48544 419 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 GALK2Q01415 458 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 RBL2Q08999 1139 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 DENND5AQ6IQ26 1287 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 SLC25A24Q6NUK1 477 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 GDPGP1Q6ZNW5 385 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 GATAD2AQ86YP4 633 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 ARHGAP12Q8IWW6 846 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 ZFAND2BQ8WV99 257 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 METTL2AQ96IZ6 378 aaKnown RBP3.28□□□□□ -1.89
CSMD3-202ENST00000339701 AP1S3Q96PC3 154 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 C7orf25Q9BPX7 421 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 TBC1D10AQ9BXI6 508 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM9BQ9NQ34 198 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 FANCLQ9NW38 375 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 PTTG2Q9NZH5 202 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 MTRRQ9UBK8 725 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 APEX2Q9UBZ4 518 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 KCNN3Q9UGI6 736 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 FAM153AQ9UHL3 310 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 TAGLN3Q9UI15 199 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 PPIEQ9UNP9 301 aaKnown RBP3.28□□□□□ -1.89
CSMD3-202ENST00000339701 DNAJC16Q9Y2G8 782 aa3.28□□□□□ -1.89
CSMD3-202ENST00000339701 PCYT1BQ9Y5K3 369 aaPredicted RBP3.28□□□□□ -1.89
CSMD3-202ENST00000339701 TRIM64A6NGJ6 449 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RAD51CO43502 376 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MOCS2O96007 188 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 GSTT1P30711 240 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CHRNB4P30926 498 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ATP5C1P36542 298 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TUBP50607 506 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 GEMP55040 296 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RRADP55042 308 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 BTN3A2P78410 334 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MRPS10P82664 201 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 POU4F1Q01851 419 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 COX10Q12887 443 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 GRIK2Q13002 908 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 NFE2L1Q14494 772 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CCDC58Q4VC31 144 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TPRG1Q6ZUI0 275 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CLEC1AQ8NC01 280 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 KIAA0895Q8NCT3 520 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SNRNP27Q8WVK2 155 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF597Q96LX8 424 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 ASB7Q9H672 318 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SIAEQ9HAT2 523 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RC3H2Q9HBD1 1191 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 SPAG4Q9NPE6 437 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MIEF1Q9NQG6 463 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 RASSF1Q9NS23 344 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CNOT8Q9UFF9 292 aaKnown RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 POU2F3Q9UKI9 436 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PSAT1Q9Y617 370 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MGAMO43451 1857 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 A0A0G2JND7 137 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 F8VZ95 297 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CDC7O00311 574 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 PPEF2O14830 753 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CYB5BO43169 146 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TEX33O43247 280 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 TRIM3O75382 744 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-202ENST00000339701 MICAL2O94851 1124 aa3.27□□□□□ -1.89
CSMD3-202ENST00000339701 CHN1P15882 459 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms