RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ATG2BQ96BY7 2078 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PIKFYVEQ9Y2I7 2098 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 EPOPA6NHQ4 379 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PRAMEF1O95521 474 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 TSPAN12O95859 305 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PENKP01210 267 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CYBBP04839 570 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 APOA4P06727 396 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CHRM1P11229 460 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CHRM3P20309 590 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 OGNP20774 298 aaKnown RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CALB2P22676 271 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 LHCGRP22888 699 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CES1P23141 567 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 SERPINB5P36952 375 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CCNHP51946 323 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 METAP1P53582 386 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 FOXA1P55317 472 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 SH3BP2P78314 561 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 ECT2LQ008S8 904 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 SULT2A1Q06520 285 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 E2F5Q15329 346 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 TSNAXIP1Q2TAA8 658 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 MYLK3Q32MK0 819 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 C18orf21Q32NC0 220 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CYHR1Q6ZMK1 362 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 GPR26Q8NDV2 337 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 RDH11Q8TC12 318 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 LKAAEAR1Q8TD35 194 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 LENG8Q96PV6 779 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 KCNA7Q96RP8 456 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 MAGEE1Q9HCI5 957 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 DNAJC28Q9NX36 388 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CD84Q9UIB8 345 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 MRPS23Q9Y3D9 190 aaKnown RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PKP3Q9Y446 797 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 NPEPPSL1A6NEC2 478 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 TMEM114B3SHH9 223 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 HDAC3O15379 428 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CCDC22O60826 627 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PABPC1P11940 636 aaKnown RBP7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PRDX3P30048 256 aaKnown RBP7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 NRIP1P48552 1158 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 SUOXP51687 545 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 AP1S1P61966 158 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PTSQ03393 145 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 KRT72Q14CN4 511 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CHRNA6Q15825 494 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 UNC50Q53HI1 259 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 SEL1L3Q68CR1 1132 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 LRRC66Q68CR7 880 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 NXNQ6DKJ4 435 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 KLC3Q6P597 504 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 C22orf39Q6P5X5 142 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CRTC1Q6UUV9 634 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 FRMD7Q6ZUT3 714 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CPNE9Q8IYJ1 553 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 TEX9Q8N6V9 391 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PTGR2Q8N8N7 351 aaPredicted RBP7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 OR2A12Q8NGT7 310 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PHOSPHO2Q8TCD6 241 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 INPP5DQ92835 1189 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 TSPAN17Q96FV3 270 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CATSPER2Q96P56 530 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 ATOH8Q96SQ7 321 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 GSTO2Q9H4Y5 243 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 ASB8Q9H765 288 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 TCF7L2Q9NQB0 619 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 GIMAP2Q9UG22 337 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 RIMKLBQ9ULI2 386 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 HS3ST2Q9Y278 367 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF510Q9Y2H8 683 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 C5orf67F2Z3F1 127 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP5HO75947 161 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 RBP1P09455 135 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PKMP14618 531 aaKnown RBP7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 PSMA3P25788 255 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 HK3P52790 923 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 GPM6BQ13491 265 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF678Q5SXM1 525 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT3A1Q6NUS8 523 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 SERPINA9Q86WD7 417 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CD200R1Q8TD46 325 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 SCG3Q8WXD2 468 aaKnown RBP7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 FUBP1Q96AE4 644 aaKnown RBP7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 SLC45A3Q96JT2 553 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 C3orf30Q96M34 536 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 CIPCQ9C0C6 399 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 EBF3Q9H4W6 596 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 IGFLR1Q9H665 355 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP13A3Q9H7F0 1226 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 TAS2R13Q9NYV9 303 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 LAMA1P25391 3075 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 F5P12259 2224 aa7.35□□□□□ -1.23
SRFBP1-201ENST00000339397 A0A0C4DFX4 3053 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 KRT87PA6NCN2 255 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 WASH3PC4AMC7 463 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 H0Y3Z8 333 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 BTN3A1O00481 513 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms