RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 RASSF1Q9NS23 344 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ABCC13Q9NSE7 274 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SH3BP4Q9P0V3 963 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 STOX2Q9P2F5 926 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ZMIZ1Q9ULJ6 1067 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ABCA6Q8N139 1617 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 FAM83GA6ND36 823 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 A6NL46 340 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 USP17L13C9JLJ4 530 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 USP17L17D6RBQ6 530 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TBX1O43435 398 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 KRT33AO76009 404 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 L1CAMP32004 1257 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 INPP1P49441 399 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CEBPAP49715 358 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CNTN2Q02246 1040 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DMP1Q13316 513 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 EFR3AQ14156 821 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SLC14A2Q15849 920 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 INTS6LQ5JSJ4 861 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PTRHD1Q6GMV3 140 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM65Q6PI78 240 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MAMDC4Q6UXC1 1216 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 RASSF6Q6ZTQ3 369 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 OR8H2Q8N162 312 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 STPG2Q8N412 459 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SLC24A4Q8NFF2 622 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 KIAA1143Q96AT1 154 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CREB3L1Q96BA8 519 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ST6GAL2Q96JF0 529 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DMRTB1Q96MA1 342 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SEC22CQ9BRL7 303 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ROGDIQ9GZN7 287 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DNTTIP1Q9H147 329 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 WDR26Q9H7D7 661 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ZFP14Q9HCL3 533 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TMOD3Q9NYL9 352 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SSR3Q9UNL2 185 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 NAALAD2Q9Y3Q0 740 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CHTOPQ9Y3Y2 248 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SNNO75324 88 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CYP2C8P10632 490 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PEPDP12955 493 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM11P17152 192 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CD72P21854 359 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF211Q13398 564 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PUM3Q15397 648 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TEAD4Q15561 434 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 XKR3Q5GH77 459 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MTX3Q5HYI7 312 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 RALGPS1Q5JS13 557 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ANGEL2Q5VTE6 544 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PLET1Q6UQ28 207 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 RNF180Q86T96 592 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DAGLBQ8NCG7 672 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MCUQ8NE86 351 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TAS1R2Q8TE23 839 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ROPN1LQ96C74 230 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 AURKBQ96GD4 344 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 NSMCE2Q96MF7 247 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CCNL2Q96S94 520 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 FUNDC2Q9BWH2 189 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ZNF436Q9C0F3 470 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TWSG1Q9GZX9 223 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 WNT5BQ9H1J7 359 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TFB2MQ9H5Q4 396 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CCM2LQ9NUG4 571 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MPP6Q9NZW5 540 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SIRPGQ9P1W8 387 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TINAGQ9UJW2 476 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 LYVE1Q9Y5Y7 322 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TAF6LQ9Y6J9 622 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 A0A1B0GVI7 797 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 FPGTO14772 594 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SLC7A4O43246 635 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CDC123O75794 336 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TPOP07202 933 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 OR52Z1P0C646 297 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CYP19A1P11511 503 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 HOXB8P17481 243 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CD247P20963 164 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DNAJB1P25685 340 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 CYP2J2P51589 502 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ALDH3A2P51648 485 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SUCLG1P53597 346 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 TRAM2Q15035 370 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 MDH1BQ5I0G3 518 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SLC35F1Q5T1Q4 408 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DPP8Q6V1X1 898 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DENND6AQ8IWF6 608 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 SVOPLQ8N434 492 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 BPIFB6Q8NFQ5 453 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ETNPPLQ8TBG4 499 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 LARP4BQ92615 738 aaKnown RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PTERQ96BW5 349 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 ERMAPQ96PL5 475 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-201ENST00000338963 NODALQ96S42 347 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 PIP5K1AQ99755 562 aa4.14□□□□□ -1.75
NEDD4-201ENST00000338963 DHRS4Q9BTZ2 278 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms