RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 COPAP53621 1224 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CDKN2DP55273 166 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RPS14P62263 151 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ACOX1Q15067 660 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DBN1Q16643 649 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TUBB8Q3ZCM7 444 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 C16orf46Q6P387 395 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TRMT11Q7Z4G4 463 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SPNS2Q8IVW8 549 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 AADATQ8N5Z0 425 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 OR2T3Q8NH03 318 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SCAMP4Q969E2 229 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 AARSD1Q9BTE6 412 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM83DQ9H4H8 585 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GRID1Q9ULK0 1009 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CORO1CQ9ULV4 474 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NDRG2Q9UN36 371 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DUSP12Q9UNI6 340 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TRBV5-4A0A0C4DH59 114 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 A0A1W2PQF6 199 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DNAJC6O75061 913 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ADH1BP00325 375 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SUOXP51687 545 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DMTNQ08495 405 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ILF2Q12905 390 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GPR33Q49SQ1 333 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ATP13A5Q4VNC0 1218 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TAF1BQ53T94 588 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 N4BP2L1Q5TBK1 243 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZNF776Q68DI1 518 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CERS6Q6ZMG9 384 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TECPR1Q7Z6L1 1165 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CLEC14AQ86T13 490 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MAFAQ8NHW3 353 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RPLP0P6Q8NHW5 317 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TSPAN17Q96FV3 270 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 BIRC8Q96P09 236 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SPATA16Q9BXB7 569 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MKRN2Q9H000 416 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CCDC68Q9H2F9 335 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 COQ6Q9Y2Z9 468 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ACOT9Q9Y305 439 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 H0Y858 1186 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GM2AP17900 193 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 C5AR1P21730 350 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ACRV1P26436 265 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PPARGP37231 505 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PTGER3P43115 390 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ETV4P43268 484 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 IL9RQ01113 521 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CCINQ13939 588 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MLF2Q15773 248 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 INSCQ1MX18 579 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FBXO43Q4G163 708 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PIP5KL1Q5T9C9 394 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 HDDC3Q8N4P3 179 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ARMC2Q8NEN0 867 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RAB7BQ96AH8 199 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM136AQ96C01 138 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CCDC97Q96F63 343 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TTC1Q99614 292 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC6A17Q9H1V8 727 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PSD3Q9NYI0 1048 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TMEM216Q9P0N5 145 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CA14Q9ULX7 337 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ANKRD6Q9Y2G4 727 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FADS3Q9Y5Q0 445 aa14.65□□□□□ -0.06
CDK5RAP3-201ENST00000338399 A0A1W2PP55 124 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 WDR91A4D1P6 747 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 AGAP14A8MT82 685 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 PSMD11O00231 422 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 MMP20O60882 483 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 RHOBTB1O94844 696 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 PKMP14618 531 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 FDXRP22570 491 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 DCDC1P59894 354 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 IRX4P78413 519 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 TIAL1Q01085 375 aaKnown RBP eCLIP14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 ITGA9Q13797 1035 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 TMEM52BQ4KMG9 183 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 CTSL3PQ5NE16 218 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 LYPLAL1Q5VWZ2 237 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 PIM3Q86V86 326 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 TMPRSS6Q8IU80 811 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 ADHFE1Q8IWW8 467 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 NXPE1Q8N323 547 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 KCTD4Q8WVF5 259 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 CKAP2Q8WWK9 683 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 COQ10AQ96MF6 247 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 RIOK2Q9BVS4 552 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 BOCQ9BWV1 1114 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 C1QTNF1Q9BXJ1 281 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 ABCG8Q9H221 673 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 GPAMQ9HCL2 828 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 RAD18Q9NS91 495 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 SERGEFQ9UGK8 458 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 EMCNQ9ULC0 261 aa14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 MTF2Q9Y483 593 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-201ENST00000338399 A0A087X1B8 175 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms