RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ACTRT2Q8TDY3 377 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ABCB8Q9NUT2 735 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MKS1Q9NXB0 559 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 LIMD1Q9UGP4 676 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PAPPAQ13219 1627 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 BHMG1C9JSJ3 638 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PTPN2P17706 415 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 HSPA7P48741 367 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 FAM171BQ6P995 826 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UBE2R2Q712K3 238 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 BEND5Q7L4P6 421 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 LZICQ8WZA0 190 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PSKH2Q96QS6 385 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ANAPC2Q9UJX6 822 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 A0A1W2PRU2 124 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CCL16O15467 120 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PAPSS2O95340 614 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ATP6V1E1P36543 226 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 VAC14Q08AM6 782 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 POM121L1PQ3SYA9 428 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 IPPKQ9H8X2 491 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 NPEPPSL1A6NEC2 478 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ADAMTS4O75173 837 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 GJB5O95377 273 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SPAM1P38567 509 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ALKAL1Q6UXT8 129 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SCD5Q86SK9 330 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PATL1Q86TB9 770 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CMTM8Q8IZV2 173 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 FAM156AQ8NDB6 213 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SPPL2AQ8TCT8 520 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ABHD14A-ACY1A0A1B0GW23 586 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CDK14O94921 469 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UGT1A6P19224 532 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UGT1A1P22309 533 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UGT1A4P22310 534 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UGT1A3P35503 534 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UGT1A5P35504 534 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 TAZQ16635 292 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 FAM98BQ52LJ0 330 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 MBLAC2Q68D91 279 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CAMK1DQ8IU85 385 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 IMP4Q96G21 291 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 TFB2MQ9H5Q4 396 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 KDELR3O43731 214 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 DSG4Q86SJ6 1040 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 DHRSXQ8N5I4 330 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 FBXO30Q8TB52 745 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ITFG1Q8TB96 612 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 DPF3Q92784 378 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 FAM83DQ9H4H8 585 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 TNRC6CQ9HCJ0 1690 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 DEC1Q9P2X7 70 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 GALPQ9UBC7 116 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 BAZ2AQ9UIF9 1905 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ZDHHC2Q9UIJ5 367 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF839A8K0R7 811 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 HOXD8P13378 290 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CCL5P13501 91 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PRKCQQ04759 706 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 BNIP2Q12982 314 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 TRIM60Q495X7 471 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ACSBG2Q5FVE4 666 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PGAM4Q8N0Y7 254 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 UNC93B1Q9H1C4 597 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 BRD9Q9H8M2 597 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ANKRD66B4E2M5 251 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PEX1O43933 1283 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 TNFAIP8O95379 198 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SIDT2Q8NBJ9 832 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 STARD8Q92502 1023 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SOD2P04179 222 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PGGT1BP53609 377 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 NPWQ8N729 165 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 NOL11Q9H8H0 719 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SCN3BQ9NY72 215 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SNX6Q9UNH7 406 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ICE1Q9Y2F5 2266 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 TM4SF4P48230 202 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SH3GL3Q99963 347 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 FGF3P11487 239 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SULT2A1Q06520 285 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ABRQ12979 859 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 SERPINA13PQ6UXR4 307 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CHST9Q7L1S5 443 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 CPSF7Q8N684 471 aaKnown RBP6.26□□□□□ -1.41
PRKDC-202ENST00000338368 PPP1R16AQ96I34 528 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 S100A14Q9HCY8 104 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 KCTD5Q9NXV2 234 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 POMPQ9Y244 141 aa6.26□□□□□ -1.41
PRKDC-202ENST00000338368 ZCWPW2A0A1B0GU75 182 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C9JVG2 144 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PRAMEF11O60813 436 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ALDOAP04075 364 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ALPIP09923 528 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 GJA1P17302 382 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 GRK3P35626 688 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RPIAP49247 311 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms