RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SATB1Q01826 763 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 ELP6Q0PNE2 266 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 TDGQ13569 410 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 ACOX1Q15067 660 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 DBN1Q16643 649 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 GPR33Q49SQ1 333 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 LIPIQ6XZB0 460 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 KYAT3Q6YP21 454 aaKnown RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 CLEC14AQ86T13 490 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 PIM3Q86V86 326 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 SPATA6LQ8N4H0 392 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 TXNDC5Q8NBS9 432 aaKnown RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 KCTD4Q8WVF5 259 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 SCAMP4Q969E2 229 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 SPATA16Q9BXB7 569 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 RSPH9Q9H1X1 276 aaPredicted RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 FAM83DQ9H4H8 585 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 CCDC134Q9H6E4 229 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 GPAMQ9HCL2 828 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 EMCNQ9ULC0 261 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 COL4A2P08572 1712 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 TCP11X1B4DZS4 312 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 MID1O15344 667 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 RHOBTB1O94844 696 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 VIMP08670 466 aaKnown RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 DHRS4L1P0CG22 281 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 P2RY2P41231 377 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 SERPINB4P48594 390 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 CNTN1Q12860 1018 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 STARD3Q14849 445 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 CST6Q15828 149 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 ATP13A5Q4VNC0 1218 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 SLC44A4Q53GD3 710 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 KIAA1211LQ6NV74 962 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 TBC1D1Q86TI0 1168 aaPredicted RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 CHMP6Q96FZ7 201 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 BIRC8Q96P09 236 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 C1QTNF1Q9BXJ1 281 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 UNKQ9C0B0 810 aaKnown RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 ABCG8Q9H221 673 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 FAM50BQ9Y247 325 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 A0A087X1B8 175 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 SPINT1O43278 529 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 PLIN3O60664 434 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 SRFP11831 508 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 PKMP14618 531 aaKnown RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 GLULP15104 373 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 FDXRP22570 491 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 ACRV1P26436 265 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 PDK4Q16654 411 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 LYPLAL1Q5VWZ2 237 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 CENPLQ8N0S6 344 aaPredicted RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 KCNV2Q8TDN2 545 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 LRRC8CQ8TDW0 803 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 FAM3CQ92520 227 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 GABRG3Q99928 467 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 MECRQ9BV79 373 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 BOCQ9BWV1 1114 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 HDAC8Q9BY41 377 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 TRBV5-4A0A0C4DH59 114 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 AREL1O15033 823 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 ADAM23O75077 832 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 COL6A2P12110 1019 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 HOXB2P14652 356 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 ZNF7P17097 686 aaPredicted RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 GLRBP48167 497 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 SUOXP51687 545 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 PDAP1Q13442 181 aaKnown RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 ITGA9Q13797 1035 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 CCDC153Q494R4 210 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 NXPE1Q8N323 547 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 OR2T3Q8NH03 318 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 NAT14Q8WUY8 206 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 NXNL1Q96CM4 212 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 CCDC97Q96F63 343 aaPredicted RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 SCYL1Q96KG9 808 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 ZNF317Q96PQ6 595 aaPredicted RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 CLPBQ9H078 707 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 NMRAL1Q9HBL8 299 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 TAS2R13Q9NYV9 303 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 COQ6Q9Y2Z9 468 aa14.59□□□□□ -0.07
CBX3-201ENST00000337620 MTF2Q9Y483 593 aaPredicted RBP14.59□□□□□ -0.07
CBX3-201ENST00000337620 ZNF106Q9H2Y7 1883 aaKnown RBP14.58□□□□□ -0.08
CBX3-201ENST00000337620 PRMT5O14744 637 aaPredicted RBP14.58□□□□□ -0.08
CBX3-201ENST00000337620 KLHL2O95198 593 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 ADH1BP00325 375 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 PROCP04070 461 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 CCDC166P0CW27 439 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 CHRM3P20309 590 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 TIAL1Q01085 375 aaKnown RBP eCLIP14.58□□□□□ -0.083e-11■■□□□ 13.3
CBX3-201ENST00000337620 DLG1Q12959 904 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 CSHL1Q14406 222 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 CTSL3PQ5NE16 218 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 ZNF776Q68DI1 518 aaPredicted RBP14.58□□□□□ -0.08
CBX3-201ENST00000337620 TRMT11Q7Z4G4 463 aaKnown RBP14.58□□□□□ -0.08
CBX3-201ENST00000337620 TECPR1Q7Z6L1 1165 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 NUDCD3Q8IVD9 361 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 LRRC34Q8IZ02 419 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms