RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 UPP1Q16831 310 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 ZNF678Q5SXM1 525 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 TAF2Q6P1X5 1199 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 OFCC1Q8IZS5 231 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 OR13C4Q8NGS5 318 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 EPB41L1Q9H4G0 881 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 GID8Q9NWU2 228 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 GPSM3Q9Y4H4 160 aa16.46■□□□□ 0.22
CDC42EP4-201ENST00000335793 ITGB1P05556 798 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 LEPRP48357 1165 aaKnown RBP16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 ALFQ53S48 1182 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 OTUD3Q5T2D3 398 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 PDZD8Q8NEN9 1154 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 MAGEE2Q8TD90 523 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 PTERQ96BW5 349 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 PLK2Q9NYY3 685 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 CDC14AQ9UNH5 594 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 TRPV2Q9Y5S1 764 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 DNAJC15Q9Y5T4 150 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 WDR90Q96KV7 1748 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 GNAO1P09471 354 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 ALDOCP09972 364 aaKnown RBP16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 HOXD8P13378 290 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 MLLT6P55198 1093 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 BCL2A1Q16548 175 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 TRIM16LQ309B1 348 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 UNC50Q53HI1 259 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 SIRPB2Q5JXA9 342 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 TMEM207Q6UWW9 146 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 PRR23BQ6ZRT6 265 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 RETREG3Q86VR2 466 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 CAMK1DQ8IU85 385 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 SLCO4A1Q96BD0 722 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 B3GALT6Q96L58 329 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 SERPINB11Q96P15 392 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 RTP3Q9BQQ7 232 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 C1orf50Q9BV19 199 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 SLC7A5P2Q9GIP4 190 aa16.45■□□□□ 0.22
CDC42EP4-201ENST00000335793 C1orf232A0A0U1RR37 186 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 CD3EAPO15446 510 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 GOT2P00505 430 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 PRSS56P0CW18 603 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 PIM1P11309 404 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 OR1E1P30953 314 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 RPL9P32969 192 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 NDST2P52849 883 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 KCNK10P57789 538 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 TRAP1Q12931 704 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 POLD3Q15054 466 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 RBBP7Q16576 425 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 USP50Q70EL3 339 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 CHERPQ8IWX8 916 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 OR13J1Q8NGT2 312 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 TRMOQ9BU70 441 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 CLOCKO15516 846 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 LBPP18428 481 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 GRK4P32298 578 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 GSSP48637 474 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 GPR15P49685 360 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 DIO3P55073 304 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 LDLRAD1Q5T700 205 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 FAM45BPQ6NSW5 357 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 FBXO39Q8N4B4 442 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 FAM45AQ8TCE6 357 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 EXOC2Q96KP1 924 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 ZNF597Q96LX8 424 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 SH3GL1Q99961 368 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 ADAM2Q99965 735 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 ZYG11BQ9C0D3 744 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 PRM3Q9NNZ6 103 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 TRPV5Q9NQA5 729 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 NME4O00746 187 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 RAMP2O60895 175 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 CDK14O94921 469 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 S1PR4O95977 384 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 CHEK2O96017 543 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 C8BP07358 591 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 ZNF23P17027 643 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 DNAJB1P25685 340 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 EEF1DP29692 281 aaKnown RBP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 HERVK_113P63132 956 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 PLCL1Q15111 1095 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 C10orf120Q5SQS8 335 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 LARP4Q71RC2 724 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 FUNDC1Q8IVP5 155 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 ERVK-6Q9BXR3 956 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 CSNK1G1Q9HCP0 422 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 OAZ3Q9UMX2 235 aa16.44■□□□□ 0.22
CDC42EP4-201ENST00000335793 FAM47E-STBD1D6RA91 191 aa16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 TRIM24O15164 1050 aa16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 GUCY1B2O75343 617 aa16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 TPD52P55327 224 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 TIGD2Q4W5G0 525 aa16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 RABL3Q5HYI8 236 aa16.43■□□□□ 0.22
CDC42EP4-201ENST00000335793 HMBOX1Q6NT76 420 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms