RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ANKRD63C9JTQ0 380 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 J3QRK9 145 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 KCNQ2O43526 872 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CSF1RP07333 972 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 UROSP10746 265 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PYHIN1Q6K0P9 492 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SVOPLQ8N434 492 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PHC3Q8NDX5 983 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 FBXL8Q96CD0 374 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PPCDCQ96CD2 204 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 LINGO1Q96FE5 620 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CDK5RAP1Q96SZ6 601 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 MGME1Q9BQP7 344 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 LMAN2LQ9H0V9 348 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PRDM16Q9HAZ2 1276 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 IFT46Q9NQC8 304 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 RDH8Q9NYR8 311 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF69Q9UC07 566 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SALL1Q9NSC2 1324 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 MCIDASD6RGH6 385 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 H3BSA7 217 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 S100A12P80511 92 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 LRRC38Q5VT99 294 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 RNF180Q86T96 592 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SEC14L1Q92503 715 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 FADS2P1A8MWK0 482 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 RFX5P48382 616 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PTPRNQ16849 979 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 LSM12Q3MHD2 195 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SETMARQ53H47 684 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 ZC3H12AQ5D1E8 599 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SH3D19Q5HYK7 790 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 NT5DC4Q86YG4 428 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 FAM156AQ8NDB6 213 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF431Q8TF32 576 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 C12orf43Q96C57 262 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 TCF25Q9BQ70 676 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 ANKRA2Q9H9E1 313 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 C5orf51A6NDU8 294 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 LRRC10BA6NIK2 292 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FSCN2O14926 492 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 PPM1BO75688 479 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 MTA2O94776 668 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TAS2R40P59535 323 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 MFSD5Q6N075 450 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF517Q6ZMY9 492 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 BEND5Q7L4P6 421 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 JAZF1Q86VZ6 243 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ATCAYQ86WG3 371 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 RBM12BQ8IXT5 1001 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CNTD1Q8N815 330 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CLIP3Q96DZ5 547 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 UNC93B1Q9H1C4 597 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SEMA3GQ9NS98 782 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 POLR3BQ9NW08 1133 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FKBP7Q9Y680 259 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TISP43B9A030 160 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FPGTO14772 594 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 MPZL2O60487 215 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 GPIP06744 558 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ASB18Q6ZVZ8 466 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 OR2L3Q8NG85 312 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SLC44A1Q8WWI5 657 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CCDC177Q9NQR7 707 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 RABL2BQ9UNT1 228 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 OR10H1Q9Y4A9 318 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CRB1P82279 1406 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 KMOO15229 486 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 NARSO43776 548 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CD36P16671 472 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TAL1P17542 331 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TTPAP49638 278 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF143P52747 638 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 MBTD1Q05BQ5 628 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TRIM28Q13263 835 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 C4orf46Q504U0 113 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 PRAMEF17Q5VTA0 474 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CEP76Q8TAP6 659 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 AHCYL2Q96HN2 611 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 INPP4AQ96PE3 977 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 LENG8Q96PV6 779 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 MRPL45Q9BRJ2 306 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FBXO44Q9H4M3 255 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 NCKAP1Q9Y2A7 1128 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 H7C2Y5 167 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 PRMT5O14744 637 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SLC22A1O15245 554 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 AKAP8O43823 692 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CD40LGP29965 261 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ECHS1P30084 290 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 IDH3AP50213 366 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TXNL4AP83876 142 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ALG11Q2TAA5 492 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ADNP2Q6IQ32 1131 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FRRS1Q6ZNA5 592 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ADGRG2Q8IZP9 1017 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 UFD1Q92890 307 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms