RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 LHX1P48742 406 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 EGFLAMQ63HQ2 1017 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 KIAA2013Q8IYS2 634 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 SFRP1Q8N474 314 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 OSCP1Q8WVF1 389 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 BIRC7Q96CA5 298 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 BDH2Q9BUT1 245 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 SEMA4BQ9NPR2 832 aaPredicted RBP23.51■■□□□ 1.35
TSKU-201ENST00000333090 GPR45Q9Y5Y3 372 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 FGF10O15520 208 aaPredicted RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 SLC7A4O43246 635 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 CCR1P32246 355 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 PCBP1Q15365 356 aaKnown RBP eCLIP23.5■■□□□ 1.356e-7■■■■■ 40.2
TSKU-201ENST00000333090 ZNF792Q3KQV3 632 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 TWF2Q6IBS0 349 aaKnown RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 PDZD8Q8NEN9 1154 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 TRUB1Q8WWH5 349 aaKnown RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 NEURL2Q9BR09 285 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 SLC25A51Q9H1U9 297 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 ADNPQ9H2P0 1102 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 MUC13Q9H3R2 512 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 PTCH2Q9Y6C5 1203 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 MEIS3P2A8K0S8 358 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 DYNC1LI2O43237 492 aaPredicted RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 SNAI1O95863 264 aaPredicted RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 SMIM10L2AP0DMW4 78 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 SMIM10L2BP0DMW5 78 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 MTHFD2P13995 350 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 CDH3P22223 829 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 CYP2C18P33260 490 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 AASDHQ4L235 1098 aaPredicted RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 COQ5Q5HYK3 327 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 ITIH5Q86UX2 942 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 PAPD5Q8NDF8 572 aaKnown RBP23.5■■□□□ 1.35
TSKU-201ENST00000333090 ARNT2Q9HBZ2 717 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 PALMDQ9NP74 551 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 SLC30A1Q9Y6M5 507 aa23.5■■□□□ 1.35
TSKU-201ENST00000333090 SOBPA7XYQ1 873 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 SYNCRIPO60506 623 aaKnown RBP23.49■■□□□ 1.35
TSKU-201ENST00000333090 SULT1C4O75897 302 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 UMPSP11172 480 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 SHMT2P34897 504 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 LDLRAP1Q5SW96 308 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 BROXQ5VW32 411 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 MYLPFQ96A32 169 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 CNDP2Q96KP4 475 aaKnown RBP23.49■■□□□ 1.35
TSKU-201ENST00000333090 KLHL5Q96PQ7 755 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 MFSD1Q9H3U5 465 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 INTS7Q9NVH2 962 aaKnown RBP23.49■■□□□ 1.35
TSKU-201ENST00000333090 NUDT5Q9UKK9 219 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 IQCA1LA6NCM1 817 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 IRAK2O43187 625 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 ADAM23O75077 832 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 RSL1D1O76021 490 aaKnown RBP23.49■■□□□ 1.35
TSKU-201ENST00000333090 SEC14L2O76054 403 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 MLLT10P55197 1068 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 GSTM4Q03013 218 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 RCAN2Q14206 197 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 CYP2A13Q16696 494 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 TIGD2Q4W5G0 525 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 SCAMP5Q8TAC9 235 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 NRBF2Q96F24 287 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 PPP1R10Q96QC0 940 aaKnown RBP23.49■■□□□ 1.35
TSKU-201ENST00000333090 LHPPQ9H008 270 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 ZNF639Q9UID6 485 aa23.49■■□□□ 1.35
TSKU-201ENST00000333090 RBM47A0AV96 593 aaKnown RBP23.48■■□□□ 1.35
TSKU-201ENST00000333090 CCDC154A6NI56 674 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 CLPXO76031 633 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 ESRRBO95718 433 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 CYBBP04839 570 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 RXRGP48443 463 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 SPATS1Q496A3 300 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 ZNF549Q6P9A3 640 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 SGCDQ92629 289 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 TBATAQ96M53 351 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 KATNBL1Q9H079 304 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 PSME2Q9UL46 239 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 ERGIC3Q9Y282 383 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 MAGED1Q9Y5V3 778 aaPredicted RBP23.48■■□□□ 1.35
TSKU-201ENST00000333090 H0Y858 1186 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 H0YAE9 185 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 TNPO2O14787 897 aaKnown RBP23.48■■□□□ 1.35
TSKU-201ENST00000333090 HRH2P25021 359 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 EEF1DP29692 281 aaKnown RBP23.48■■□□□ 1.35
TSKU-201ENST00000333090 UFM1P61960 85 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 CLCQ05315 142 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 NIPAL1Q6NVV3 410 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 SCIMPQ6UWF3 145 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 RAB2BQ8WUD1 216 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 TSPAN18Q96SJ8 248 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 BEGAINQ9BUH8 593 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 NANOGQ9H9S0 305 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 TLR9Q9NR96 1032 aa23.48■■□□□ 1.35
TSKU-201ENST00000333090 SMIM35A0A1B0GVV1 85 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 C1RP00736 705 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 FDXRP22570 491 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 CLCNKBP51801 687 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 AFF1P51825 1210 aaKnown RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 ARSFP54793 590 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 DSC2Q02487 901 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms