RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ITM2BQ9Y287 266 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 PCDHGB7Q9Y5F8 929 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 GON4LQ3T8J9 2241 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 ANKRD36A6QL64 1941 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ARID1BQ8NFD5 2236 aaPredicted RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 LY6G6EA0A0G2JKS1 128 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 AKR1B15C9JRZ8 316 aaPredicted RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 K7ESM1 405 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 TRIM38O00635 465 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 MUSKO15146 869 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 SIGLEC6O43699 453 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 TCEA3O75764 348 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ZNF189O75820 626 aaPredicted RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 RASGRP1O95267 797 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 PGLSO95336 258 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 TOP3BO95985 862 aaKnown RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 CPP00450 1065 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 CTSBP07858 339 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ELFN1P0C7U0 828 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 TSHRP16473 764 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 VIPR1P32241 457 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 LIG3P49916 1009 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 SCNN1BP51168 640 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 HK3P52790 923 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 CLDN2P57739 230 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 PPARDQ03181 441 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 DPTQ07507 201 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 PPIDQ08752 370 aaKnown RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 PEX6Q13608 980 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 PDE1CQ14123 709 aaPredicted RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 IRF4Q15306 451 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ELOCQ15369 112 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 WSCD2Q2TBF2 565 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 SLC9A4Q6AI14 798 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 TXNRD3NBQ6F5E7 133 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 LEKR1Q6ZMV7 388 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ARHGAP36Q6ZRI8 547 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 USP45Q70EL2 814 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 BZW1Q7L1Q6 419 aaKnown RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 CAMK1DQ8IU85 385 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 EGFL6Q8IUX8 553 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 PHACTR4Q8IZ21 702 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 KCTD6Q8NC69 237 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 SLC35G2Q8TBE7 412 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 KLK6Q92876 244 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 SCRN2Q96FV2 425 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 MRFAP1L1Q96HT8 127 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 EXOC2Q96KP1 924 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 APOLD1Q96LR9 279 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 WDR92Q96MX6 357 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ZNF830Q96NB3 372 aaPredicted RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 RNF157Q96PX1 679 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 LYSMD1Q96S90 227 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 APOOQ9BUR5 198 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 YIPF2Q9BWQ6 316 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 SLC13A1Q9BZW2 595 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 LUC7LQ9NQ29 371 aaKnown RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 ETNK2Q9NVF9 386 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 DNAJC28Q9NX36 388 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 APOBEC3BQ9UH17 382 aaKnown RBP6.34□□□□□ -1.39
SMG1-201ENST00000330588 CA5BQ9Y2D0 317 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 ACTL7BQ9Y614 415 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 U3KQA8 63 aa6.34□□□□□ -1.39
SMG1-201ENST00000330588 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.4
SMG1-201ENST00000330588 LRRK1Q38SD2 2015 aa6.34□□□□□ -1.4
SMG1-201ENST00000330588 DOCK9Q9BZ29 2069 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 EME2A4GXA9 379 aaPredicted RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 RGSL1A5PLK6 1076 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 C3orf70A6NLC5 250 aaPredicted RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 BTNL10A8MVZ5 291 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 MTSS1O43312 755 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 PSTPIP1O43586 416 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 MFSD11O43934 449 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 OPA1O60313 960 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 RECQL5O94762 991 aaPredicted RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 HEXIM1O94992 359 aaKnown RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 ANXA6P08133 673 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 MYCLP1P12525 358 aaPredicted RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 PNLIPP16233 465 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 KDELR1P24390 212 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 NR2C2P49116 596 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 IFI35P80217 286 aaPredicted RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 NR0B2Q15466 257 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 TAZQ16635 292 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 CLPPQ16740 277 aaPredicted RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 PRAMEF14Q5SWL7 426 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 ARMC12Q5T9G4 340 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 DHRS13Q6UX07 377 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 ZSWIM9Q86XI8 627 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 GKN2Q86XP6 184 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 RHOT1Q8IXI2 618 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 NRSN1Q8IZ57 195 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 PGBD5Q8N414 524 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 OTUD6BQ8N6M0 293 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 PNPLA1Q8N8W4 532 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 PCDH19Q8TAB3 1148 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 DTD2Q96FN9 168 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms