RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 BTBD10Q9BSF8 475 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 GSTO2Q9H4Y5 243 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 ZDHHC6Q9H6R6 413 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 TNFRSF12AQ9NP84 129 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 SCN8AQ9UQD0 1980 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 PRRC2BQ5JSZ5 2229 aaKnown RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 WASH3PC4AMC7 463 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 TSPAN12O95859 305 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 CYP17A1P05093 508 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 POLR2EP19388 210 aaKnown RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 HK2P52789 917 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 KCNC3Q14003 757 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 UNC50Q53HI1 259 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 ZNF678Q5SXM1 525 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 SEL1L3Q68CR1 1132 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 TRIM68Q6AZZ1 485 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 TPRG1Q6ZUI0 275 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 SERPINA9Q86WD7 417 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 PARP9Q8IXQ6 854 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 CBARPQ8N350 705 aaPredicted RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 CYB5D2Q8WUJ1 264 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 L3HYPDHQ96EM0 354 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 ZNF641Q96N77 438 aaPredicted RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 OSBPL1AQ9BXW6 950 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 CADM1Q9BY67 442 aaKnown RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 WDR55Q9H6Y2 383 aaPredicted RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 DUS2Q9NX74 493 aaKnown RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 TAS2R1Q9NYW7 299 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 VTI1BQ9UEU0 232 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 TRBV5-4A0A0C4DH59 114 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 A8MUI8 341 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 TMEM233B4DJY2 109 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 VPS26AO75436 327 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 PRAMEF1O95521 474 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 ESR1P03372 595 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 JUNP05412 331 aaKnown RBP16.84■□□□□ 0.29
DDX41-201ENST00000330503 UGT2B4P06133 528 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 UGT1A6P19224 532 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 AOC1P19801 751 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 UGT1A1P22309 533 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 UGT1A4P22310 534 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 UGT1A3P35503 534 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 UGT1A5P35504 534 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 NFKB2Q00653 900 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 RAD51Q06609 339 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 CHRNA6Q15825 494 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 EML3Q32P44 896 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 TCEAL5Q5H9L2 206 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 FRMD7Q6ZUT3 714 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 SNX20Q7Z614 316 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 PLPP6Q8IY26 295 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 CD200R1Q8TD46 325 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 ASIC4Q96FT7 647 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 RAB3IPQ96QF0 476 aaPredicted RBP16.84■□□□□ 0.29
DDX41-201ENST00000330503 MCCC1Q96RQ3 725 aaPredicted RBP16.84■□□□□ 0.29
DDX41-201ENST00000330503 ASB8Q9H765 288 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 TAGLN3Q9UI15 199 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 COMMD10Q9Y6G5 202 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 IQCF5A8MTL0 148 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 TTC34A8MYJ7 566 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 SLCO1B7G3V0H7 640 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 UBXN8O00124 270 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 CDC7O00311 574 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 SNUPNO95149 360 aaKnown RBP16.84■□□□□ 0.29
DDX41-201ENST00000330503 PYGLP06737 847 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 TPBGLP0DKB5 382 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 MAGEA10P43363 369 aaPredicted RBP16.84■□□□□ 0.29
DDX41-201ENST00000330503 CPA2P48052 419 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 PTSQ03393 145 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 NFATC2Q13469 925 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 TBCCQ15814 346 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 FAM78AQ5JUQ0 283 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 CERS6Q6ZMG9 384 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 STK40Q8N2I9 435 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 FBXO27Q8NI29 283 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 OSCP1Q8WVF1 389 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 KCNJ9Q92806 393 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 NUF2Q9BZD4 464 aa16.84■□□□□ 0.29
DDX41-201ENST00000330503 GOLGA8QA0A0J9YX86 632 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 GOLGA8OA6NCC3 632 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 GOLGA8NF8WBI6 632 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 UBFD1O14562 309 aaKnown RBP16.83■□□□□ 0.28
DDX41-201ENST00000330503 PRMT5O14744 637 aaPredicted RBP16.83■□□□□ 0.28
DDX41-201ENST00000330503 GSC2O15499 205 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 SMIM24O75264 130 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 CHRM3P20309 590 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 LHCGRP22888 699 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 CLCN7P51798 805 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 ATP6V0D1P61421 351 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 SH2D4BQ5SQS7 431 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 GRAMD4Q6IC98 578 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 RFLNAQ6ZTI6 216 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 NKAPQ8N5F7 415 aaKnown RBP16.83■□□□□ 0.28
DDX41-201ENST00000330503 GPR26Q8NDV2 337 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 NUP210Q8TEM1 1887 aaPredicted RBP16.83■□□□□ 0.28
DDX41-201ENST00000330503 NAT14Q8WUY8 206 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 EEF1AKMT1Q8WVE0 214 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 EXT2Q93063 718 aa16.83■□□□□ 0.28
DDX41-201ENST00000330503 PPP1R36Q96LQ0 422 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms