RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 OLR1P78380 273 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ADARB1P78563 741 aaKnown RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 TXNRD3NBQ6F5E7 133 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 TMEM81Q6P7N7 255 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF767PQ75MW2 155 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 DDIASQ8IXT1 998 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 OR52H1Q8NGJ2 320 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 NSUN6Q8TEA1 469 aaKnown RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 MCEEQ96PE7 176 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF224Q9NZL3 707 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 KCNU1A8MYU2 1149 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 TRIM24O15164 1050 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CST8O60676 142 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CFBP00751 764 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CNTFP26441 200 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 RPL9P32969 192 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 GMPRP36959 345 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 HSD17B2P37059 387 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 IL12RB1P42701 662 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 RPS9P46781 194 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 TEKQ02763 1124 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 BTN1A1Q13410 526 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 GPR50Q13585 617 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 BCL7AQ4VC05 210 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 FAM26DQ5JW98 314 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 METTL11BQ5VVY1 283 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 BRAT1Q6PJG6 821 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 LIPIQ6XZB0 460 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 NIPA1Q7RTP0 329 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CMTR2Q8IYT2 770 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 FNDC5Q8NAU1 212 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 LRRC39Q96DD0 335 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 GAD1Q99259 594 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 HDHD5Q9BXW7 423 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CHRAC1Q9NRG0 131 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 AGPAT4Q9NRZ5 378 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 TRMT6Q9UJA5 497 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 PSAT1Q9Y617 370 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 OR6C70A6NIJ9 312 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 C2orf81A6NN90 581 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 PRSS44E7EML9 344 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 ARHGEF9O43307 516 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 PLIN3O60664 434 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 TADA2AO75478 443 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 PIGNO95427 931 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CCNE2O96020 404 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 JUNP05412 331 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 PROS1P07225 676 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 PCSK2P16519 638 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 MSH3P20585 1137 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 GRK3P35626 688 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 OGDHQ02218 1023 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 ALDH6A1Q02252 535 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 SLC25A11Q02978 314 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 DMP1Q13316 513 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 CA9Q16790 459 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 FAXCQ5TGI0 409 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF517Q6ZMY9 492 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 SPRED1Q7Z699 444 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF518BQ9C0D4 1074 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 GPRC5CQ9NQ84 441 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 NECTIN3Q9NQS3 549 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 ENTPD7Q9NQZ7 604 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 RNF181Q9P0P0 153 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 OPTCQ9UBM4 332 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 REV1Q9UBZ9 1251 aa11.8□□□□□ -0.52
SHMT2-201ENST00000328923 ZC3H7BQ9UGR2 993 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 NUFIP1Q9UHK0 495 aaKnown RBP11.8□□□□□ -0.52
SHMT2-201ENST00000328923 F8W810 466 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 RGS5O15539 181 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF623O75123 536 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 HSPA4LO95757 839 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 ALBP02768 609 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 ITGB3P05106 788 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 PROZP22891 400 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 YWHABP31946 246 aaKnown RBP11.79□□□□□ -0.52
SHMT2-201ENST00000328923 GP5P40197 560 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 SCNN1GP51170 649 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 YWHAZP63104 245 aaKnown RBP11.79□□□□□ -0.52
SHMT2-201ENST00000328923 DYNLT1P63172 113 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 NKX3-2P78367 333 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 CNTN2Q02246 1040 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 FAPQ12884 760 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 TRAP1Q12931 704 aaKnown RBP11.79□□□□□ -0.52
SHMT2-201ENST00000328923 PPIL2Q13356 520 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 BTBD16Q32M84 506 aa11.79□□□□□ -0.52
SHMT2-201ENST00000328923 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms