RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ATOH8Q96SQ7 321 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 HAUS8Q9BT25 410 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 CINPQ9BW66 212 aaPredicted RBP13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 CRISPLD1Q9H336 500 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 GID8Q9NWU2 228 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 CMTM6Q9NX76 183 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 SARDHQ9UL12 918 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 DMTF1Q9Y222 760 aa13.98□□□□□ -0.17
ATP2C1-201ENST00000328560 GPR39O43194 453 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 OR1I1O60431 355 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 PRAMEF11O60813 436 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 NIPSNAP2O75323 286 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC10A3P09131 477 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 PSMA4P25789 261 aaKnown RBP13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 OXTRP30559 389 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 KCNK10P57789 538 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 UGT3A1Q6NUS8 523 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 TAS2R42Q7RTR8 314 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 BBS5Q8N3I7 341 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 CDYL2Q8N8U2 506 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 FEM1CQ96JP0 617 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 C8orf48Q96LL4 319 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 TEX37Q96LM6 180 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 TCF12Q99081 682 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 HGH1Q9BTY7 390 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 GPR62Q9BZJ7 368 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 CD274Q9NZQ7 290 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 HEMK1Q9Y5R4 338 aaPredicted RBP13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 ADAMTS4O75173 837 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 OAZ2O95190 189 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 NDST3O95803 873 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 EOMESO95936 686 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 GATMP50440 423 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 LCP2Q13094 533 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 TAF12Q16514 161 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 TIGD2Q4W5G0 525 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 ARHGAP22Q7Z5H3 698 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF598Q86UK7 904 aaKnown RBP13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 SIDT2Q8NBJ9 832 aaKnown RBP13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 ROPN1LQ96C74 230 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 SYTL2Q9HCH5 934 aa13.97□□□□□ -0.17
ATP2C1-201ENST00000328560 IQCF5A8MTL0 148 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 SNX2O60749 519 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 IRF1P10914 325 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC26A3P40879 764 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 PSMD8P48556 350 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 UFM1P61960 85 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 TTC33Q6PID6 262 aaPredicted RBP13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 BHMTQ93088 406 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC2A11Q9BYW1 496 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 SLAMF8Q9P0V8 285 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 USP22Q9UPT9 525 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 ZFP37Q9Y6Q3 630 aaPredicted RBP13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 ASLP04424 464 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC6A2P23975 617 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 FASP25445 335 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 C16orf59Q7L2K0 433 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 ERMP1Q7Z2K6 904 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 B4GALNT2Q8NHY0 566 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 TRIM15Q9C019 465 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 EPB41L1Q9H4G0 881 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 SOX17Q9H6I2 414 aaPredicted RBP13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 FNIP2Q9P278 1114 aa13.96□□□□□ -0.17
ATP2C1-201ENST00000328560 ARPC2O15144 300 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 HNRNPRO43390 633 aaKnown RBP13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 WISP3O95389 354 aaPredicted RBP13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 ALDH2P05091 517 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 RPS6KA3P51812 740 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 APOFQ13790 326 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 LRRC23Q53EV4 343 aaPredicted RBP13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 LINGO4Q6UY18 593 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 LPCAT2Q7L5N7 544 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 DENND1CQ8IV53 801 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 OFCC1Q8IZS5 231 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 NUDT8Q8WV74 236 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 HOPXQ9BPY8 73 aaPredicted RBP13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 TFB2MQ9H5Q4 396 aaKnown RBP13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 EIF2B4Q9UI10 523 aaKnown RBP13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 FKBPLQ9UIM3 349 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 OAZ3Q9UMX2 235 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 MIA3Q5JRA6 1907 aa13.96□□□□□ -0.18
ATP2C1-201ENST00000328560 IGLV3-10A0A075B6K4 115 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 GOLGA8CPA6NN73 597 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 E5RI56 91 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CHEK2O96017 543 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC5A2P31639 672 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 YBEYP58557 167 aaPredicted RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 GNA12Q03113 381 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PLA2G4EQ3MJ16 856 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 KANK2Q63ZY3 851 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 RNF19BQ6ZMZ0 732 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PIANPQ8IYJ0 282 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 RAET1EQ8TD07 263 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 KIAA1191Q96A73 305 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms