RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 CREMQ03060 361 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 ACOX1Q15067 660 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 SNAPC1Q16533 368 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 CYP2U1Q7Z449 544 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 PTGR2Q8N8N7 351 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-201ENST00000328333 PIGXQ8TBF5 258 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 TRNT1Q96Q11 434 aaKnown RBP14.23□□□□□ -0.13
COL7A1-201ENST00000328333 MROH8Q9H579 483 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 MTRRQ9UBK8 725 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 DAGLAQ9Y4D2 1042 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 ERCC6L2Q5T890 1561 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 MID1O15344 667 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 PDHA2P29803 388 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 TMEM119Q4V9L6 283 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 EIPR1Q53HC9 387 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 GNASQ5JWF2 1037 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 UNC93AQ86WB7 457 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 GSTCDQ8NEC7 633 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 PFDN5Q99471 154 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 TPK1Q9H3S4 243 aa14.23□□□□□ -0.13
COL7A1-201ENST00000328333 MT-CO1P00395 513 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 PRR5P85299 388 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 HLFQ16534 295 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 RNF180Q86T96 592 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CEP76Q8TAP6 659 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 RAET1EQ8TD07 263 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 KAT2BQ92831 832 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 ZNF354BQ96LW1 612 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 KCTD7Q96MP8 289 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 OR10H1Q9Y4A9 318 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CLCA1A8K7I4 914 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TRIM3O75382 744 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 SLC18A1P54219 525 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TCEAL6Q6IPX3 200 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 LINC00471Q8N535 108 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 FRMD6Q96NE9 622 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TMEM165Q9HC07 324 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 SNRPD1P62314 119 aaKnown RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 PNMA5Q96PV4 448 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 PDP1Q9P0J1 537 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CDK5RAP2Q96SN8 1893 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A9O60656 530 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 BPGMP07738 259 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A6P19224 532 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A1P22309 533 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A4P22310 534 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CDC25CP30307 473 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A3P35503 534 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A7Q9HAW7 530 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A10Q9HAW8 530 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 UGT1A8Q9HAW9 530 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 C3orf14Q9HBI5 128 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 APC2O95996 2303 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 FABP12A6NFH5 140 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TPSB2P20231 275 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TPSAB1Q15661 275 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TXNRD3Q86VQ6 643 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TDRPQ86YL5 185 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 IQCF2Q8IXL9 164 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 BEND7Q8N7W2 519 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 WNT8BQ93098 351 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 SLC35C1Q96A29 364 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 S100PBPQ96BU1 408 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 EIF3KQ9UBQ5 218 aaKnown RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 IQCMA0A1B0GVH7 501 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 ISPDA4D126 451 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 OR10H2O60403 315 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 TRBC1P01850 177 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 C8BP07358 591 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 GRIA1P42261 906 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 DEFA5Q01523 94 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CBR4Q8N4T8 237 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 M0R036 132 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 SHBGP04278 402 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 GIMD1P0DJR0 217 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 ADGRG6Q86SQ4 1221 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 GALNT6Q8NCL4 622 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 GAL3ST3Q96A11 431 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 C12orf43Q96C57 262 aaKnown RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 GPER1Q99527 375 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CUEDC1Q9NWM3 386 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 CALML5Q9NZT1 146 aa14.22□□□□□ -0.13
COL7A1-201ENST00000328333 RPL36Q9Y3U8 105 aaKnown RBP14.22□□□□□ -0.13
COL7A1-201ENST00000328333 IPO13O94829 963 aaKnown RBP14.21□□□□□ -0.13
COL7A1-201ENST00000328333 MICAL2O94851 1124 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 CYB5AP00167 134 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 NOS2P35228 1153 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 CDKL1Q00532 357 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 MFSD10Q14728 455 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 ZNF311Q5JNZ3 666 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 RBM15BQ8NDT2 890 aaKnown RBP14.21□□□□□ -0.13
COL7A1-201ENST00000328333 UNKLQ9H9P5 680 aaKnown RBP14.21□□□□□ -0.13
COL7A1-201ENST00000328333 UROSP10746 265 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 TFEBP19484 476 aa14.21□□□□□ -0.13
COL7A1-201ENST00000328333 PBLDP30039 288 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms