RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TIPRL	O75663	272 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	FAS	P25445	335 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	S100A3	P33764	101 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	DPYS	Q14117	519 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	ZNF789	Q5FWF6	425 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	GET4	Q7L5D6	327 aa	Predicted RBP	11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	HORMAD1	Q86X24	394 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	C7orf61	Q8IZ16	206 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	RP9	Q8TA86	221 aa	Known RBP	11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	PNPT1	Q8TCS8	783 aa	Known RBP	11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	KLK6	Q92876	244 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	C19orf60	Q96EN9	201 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	KCNA7	Q96RP8	456 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	ARHGEF3	Q9NR81	526 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	TLL2	Q9Y6L7	1015 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771		U3KQV3	271 aa		11.78	□□□□□ -0.52
DDR1-223	ENST00000324771	ADAM12	O43184	909 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	CDK14	O94921	469 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	TGDS	O95455	350 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	VCL	P18206	1134 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	CD68	P34810	354 aa	Predicted RBP	11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	CLC	Q05315	142 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	PCLAF	Q15004	111 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	ANKRD46	Q86W74	232 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	SYT12	Q8IV01	421 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	SPPL2A	Q8TCT8	520 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	SMAD5	Q99717	465 aa	Known RBP	11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	TRIM8	Q9BZR9	551 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	ROGDI	Q9GZN7	287 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	IPPK	Q9H8X2	491 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	LNPEP	Q9UIQ6	1025 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	CDH22	Q9UJ99	828 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	LAMB1	P07942	1786 aa		11.77	□□□□□ -0.52
DDR1-223	ENST00000324771	PTGES3L	E9PB15	166 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	INPPL1	O15357	1258 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	FFAR2	O15552	330 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	SLC7A4	O43246	635 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	GJB3	O75712	270 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	TM7SF2	O76062	418 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	CLDN7	O95471	211 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	CLPTM1	O96005	669 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	PRKG2	Q13237	762 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771		Q6ZVU0	165 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	RBFA	Q8N0V3	343 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	APOLD1	Q96LR9	279 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	TLE6	Q9H808	572 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	SSU72	Q9NP77	194 aa	Known RBP	11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	GNPTG	Q9UJJ9	305 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	DYRK1B	Q9Y463	629 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	WNT6	Q9Y6F9	365 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	MAST2	Q6P0Q8	1798 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	GABRD	O14764	452 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	CAPN1	P07384	714 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	ELFN1	P0C7U0	828 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	PAX3	P23760	479 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	AQP1	P29972	269 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	HCAR3	P49019	387 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	MAPKAPK2	P49137	400 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	NIPAL4	Q0D2K0	466 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	MAPKAPK3	Q16644	382 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	PLEKHG4	Q58EX7	1191 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	FRMD7	Q6ZUT3	714 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	UBE2R2	Q712K3	238 aa	Predicted RBP	11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	CHST9	Q7L1S5	443 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	DHDDS	Q86SQ9	333 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	SNRNP27	Q8WVK2	155 aa	Known RBP	11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	SIKE1	Q9BRV8	207 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	UBR3	Q6ZT12	1888 aa		11.77	□□□□□ -0.53
DDR1-223	ENST00000324771	OR1I1	O60431	355 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	MAFK	O60675	156 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	ALOX15	P16050	662 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	STK19	P49842	368 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	MTX3	Q5HYI7	312 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	ADAMTSL2	Q86TH1	951 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	CEP97	Q8IW35	865 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	ACVR1C	Q8NER5	493 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	FLCN	Q8NFG4	579 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	DENND1A	Q8TEH3	1009 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	THAP11	Q96EK4	314 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	C8orf48	Q96LL4	319 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	INVS	Q9Y283	1065 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771		A8MT66	165 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	MGRN1	O60291	552 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	RNASEH1	O60930	286 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	TBX10	O75333	385 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	CAT	P04040	527 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	DLD	P09622	509 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	TPP2	P29144	1249 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	MOGS	Q13724	837 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	NET1	Q7Z628	596 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	ZNF614	Q8N883	585 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	ZNF555	Q8NEP9	628 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	MRGPRX2	Q96LB1	330 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	OLFM3	Q96PB7	478 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	CIB1	Q99828	191 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	MIEF1	Q9NQG6	463 aa		11.76	□□□□□ -0.53
DDR1-223	ENST00000324771	TMEM30A	Q9NV96	361 aa		11.76	□□□□□ -0.53

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