RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SEPT3Q9UH03 358 aa7.59□□□□□ -1.19
TRIM55-202ENST00000315962 FNDC1Q4ZHG4 1894 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-202ENST00000315962 MYOFQ9NZM1 2061 aa7.59□□□□□ -1.2
TRIM55-202ENST00000315962 LOC285095A0A1B0GVY8 99 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ATP6AP2A0A1C7CYW4 349 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF195O14628 629 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CD3EAPO15446 510 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 KDELR3O43731 214 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DLX3O60479 287 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ATP6AP2O75787 350 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PARNO95453 639 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CTSAP10619 480 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CNTFP26441 200 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MAPKAPK2P49137 400 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 NME5P56597 212 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DYNC1I2Q13409 638 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ZRANB3Q5FWF4 1079 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ARMC12Q5T9G4 340 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PSAPL1Q6NUJ1 521 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PQLC1Q8N2U9 271 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CLDN19Q8N6F1 224 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DNAJC5GQ8N7S2 189 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ATP6V1E2Q96A05 226 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HSPBAP1Q96EW2 488 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LRGUKQ96M69 825 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 KLHL32Q96NJ5 620 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PSKH2Q96QS6 385 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 IL23AQ9NPF7 189 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 VPS45Q9NRW7 570 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 FKBPLQ9UIM3 349 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 INSL6Q9Y581 213 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 WNT6Q9Y6F9 365 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ANKRD66B4E2M5 251 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LEFTY2O00292 366 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CCNT2O60583 730 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LILRB3O75022 631 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 SIX3O95343 332 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 GLP2RO95838 553 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 S1PR4O95977 384 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 GLUD1P00367 558 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CA3P07451 260 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TFPTP0C1Z6 253 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PABPC4LP0CB38 370 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HSPA8P11142 646 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 UGT1A6P19224 532 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 UGT1A1P22309 533 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 UGT1A4P22310 534 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PIK3R1P27986 724 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HTR7P34969 479 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CA5AP35218 305 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 UGT1A3P35503 534 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 UGT1A5P35504 534 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 FPGSQ05932 587 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 SLC12A1Q13621 1099 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CEACAM7Q14002 265 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TMEM240Q5SV17 173 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 C9orf50Q5SZB4 431 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HECTD2Q5U5R9 776 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF549Q6P9A3 640 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 FAM151BQ6UXP7 276 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 RFLNAQ6ZTI6 216 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LRRC49Q8IUZ0 686 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 C2CD4AQ8NCU7 369 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ACTRT2Q8TDY3 377 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CDKN2AIPNLQ96HQ2 116 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 SLC39A3Q9BRY0 314 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 C1QTNF1Q9BXJ1 281 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TNFRSF12AQ9NP84 129 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ADA2Q9NZK5 511 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 INTS6Q9UL03 887 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ARHGAP26Q9UNA1 814 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 VWA7Q9Y334 891 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MROH6A6NGR9 719 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PSMD3O43242 534 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TPST1O60507 370 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 SEC24DO94855 1032 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 KLHL2O95198 593 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ASLP04424 464 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ADH1AP07327 375 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HLA-FP30511 346 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HADHAP40939 763 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LMAN2Q12907 356 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CAMK1Q14012 370 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MYBPC3Q14896 1274 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LSM12Q3MHD2 195 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DGKKQ5KSL6 1271 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 PGM2L1Q6PCE3 622 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 GK5Q6ZS86 529 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 LYSMD3Q7Z3D4 306 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CACUL1Q86Y37 369 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 HERC6Q8IVU3 1022 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CMTR2Q8IYT2 770 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DSELQ8IZU8 1212 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MYO1HQ8N1T3 1032 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TXNDC5Q8NBS9 432 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 OR4L1Q8NH43 312 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 CYB5D2Q8WUJ1 264 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms