RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 BTKQ06187 659 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 TSNQ15631 228 aaKnown RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 SETMARQ53H47 684 aaPredicted RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 ZNF697Q5TEC3 545 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 PLPP4Q5VZY2 271 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 NCEH1Q6PIU2 408 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 FAM151BQ6UXP7 276 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 MYLK4Q86YV6 388 aaPredicted RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 RIN3Q8TB24 985 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 LPGAT1Q92604 370 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 CMTM5Q96DZ9 223 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 SLC45A3Q96JT2 553 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 AARSD1Q9BTE6 412 aaKnown RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 SLC46A2Q9BY10 475 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 GPR63Q9BZJ6 419 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 FBRSL1Q9HCM7 1045 aaKnown RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 OR51B4Q9Y5P0 310 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 GFAPP14136 432 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 NME5P56597 212 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 TBCCQ15814 346 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 ST13P4Q8IZP2 240 aaPredicted RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 TCF25Q9BQ70 676 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 ADGRE3Q9BY15 652 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 GSTO2Q9H4Y5 243 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 STX16-NPEPL1H3BU86 382 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 CHRM3P20309 590 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 FOXA1P55317 472 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 LMAN2Q12907 356 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 MTA1Q13330 715 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 DNAL1Q4LDG9 190 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 CMTR2Q8IYT2 770 aaKnown RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 USP13Q92995 863 aaPredicted RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 RCN3Q96D15 328 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 ALG14Q96F25 216 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 ZBP1Q9H171 429 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 VCX3BQ9H321 246 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 VCX3AQ9NNX9 186 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 SORCS3Q9UPU3 1222 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 COPG1Q9Y678 874 aaKnown RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 NPEPPSL1A6NEC2 478 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 SUPT3HB4E1H0 165 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 C9JVG2 144 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 SDHDO14521 159 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 TRIM24O15164 1050 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 SUPT3HO75486 399 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 WISP3O95389 354 aaPredicted RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 RFTN1Q14699 578 aaPredicted RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 SLC14A2Q15849 920 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 Q6ZNB5 142 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 ITIH5Q86UX2 942 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 LCA5Q86VQ0 697 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 DRAXINQ8NBI3 349 aaPredicted RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 KREMEN2Q8NCW0 462 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 PPP2R3CQ969Q6 453 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 BIRC8Q96P09 236 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 SEMA4BQ9NPR2 832 aaPredicted RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 INTS6Q9UL03 887 aaKnown RBP12.36□□□□□ -0.43
RNF4-201ENST00000314289 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
RNF4-201ENST00000314289 BTN3A1O00481 513 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 LILRB3O75022 631 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 MTHFD2P13995 350 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 AGTR2P50052 363 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 SH3BP2P78314 561 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 TBL3Q12788 808 aaKnown RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 PABPC1LQ4VXU2 614 aaKnown RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 UNC50Q53HI1 259 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 SFT2D3Q587I9 215 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 ZNF678Q5SXM1 525 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 AFTPHQ6ULP2 937 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 GK5Q6ZS86 529 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 FAM43BQ6ZT52 329 aaPredicted RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 TMC8Q8IU68 726 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 CLDN19Q8N6F1 224 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 TRPC4APQ8TEL6 797 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 CNDP1Q96KN2 507 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 NPAS2Q99743 824 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 ABCB8Q9NUT2 735 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 LEFTY2O00292 366 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 NPHS1O60500 1241 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 ENO3P13929 434 aaPredicted RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 UGT1A6P19224 532 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 UGT1A1P22309 533 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 UGT1A4P22310 534 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 UGT1A3P35503 534 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 UGT1A5P35504 534 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 PKNOX1P55347 436 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 NTHL1P78549 312 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 CPNE9Q8IYJ1 553 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 FIBCD1Q8N539 461 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 OR9I1Q8NGQ6 314 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 GPR150Q8NGU9 434 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 NMD3Q96D46 503 aaKnown RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 C3orf30Q96M34 536 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms