RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SMPD2O60906 423 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 RNASEH1O60930 286 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 POP4O95707 220 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 IGLV3-19P01714 112 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CTSLP07711 333 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SP9P0CG40 484 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CCNB1P14635 433 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 ZNF3P17036 446 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CR2P20023 1033 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CHRNA3P32297 505 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CXCR5P32302 372 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 HSPA9P38646 679 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 MMP13P45452 471 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 RECQLP46063 649 aaPredicted RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 ID4P47928 161 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 RHOAP61586 193 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 RPS14P62263 151 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 IFI35P80217 286 aaPredicted RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 OTUD4Q01804 1114 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 FRG1Q14331 258 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 MYLK3Q32MK0 819 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 PAPD7Q5XG87 772 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 ANO7Q6IWH7 933 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 ZC3H18Q86VM9 953 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 STK40Q8N2I9 435 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 OR2C3Q8N628 320 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CHST14Q8NCH0 376 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CCNYQ8ND76 341 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 OR52K1Q8NGK4 314 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 NSMCE1Q8WV22 266 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 TFB1MQ8WVM0 346 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 HMGB4Q8WW32 186 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 OR8D1Q8WZ84 308 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CDKL2Q92772 493 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 FAM131CQ96AQ9 280 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SIPA1Q96FS4 1042 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 GDAP1L1Q96MZ0 367 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 TAAR9Q96RI9 348 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 OSBPL9Q96SU4 736 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 IL12RB2Q99665 862 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 MGME1Q9BQP7 344 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 HEPHQ9BQS7 1158 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 CPEB1Q9BZB8 566 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 ACPTQ9BZG2 426 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 TM6SF2Q9BZW4 377 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 PDE7BQ9NP56 450 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 INTS7Q9NVH2 962 aaKnown RBP8.25□□□□□ -1.09
CHD6-201ENST00000309279 TBCCD1Q9NVR7 557 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SARDHQ9UL12 918 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SNX12Q9UMY4 172 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SCML1Q9UN30 329 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SESN1Q9Y6P5 492 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 WASF2Q9Y6W5 498 aa8.25□□□□□ -1.09
CHD6-201ENST00000309279 SPAG17Q6Q759 2223 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 KCNK1O00180 336 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 AXIN1O15169 862 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 ZNF217O75362 1048 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 IGSF6O95976 241 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 FGGP02679 453 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 PRNPP04156 253 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 ARAFP10398 606 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 TCP1P17987 556 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 ALAS2P22557 587 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 CES1P23141 567 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 CCND1P24385 295 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 RGRP47804 291 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 NR1H2P55055 460 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 PLTPP55058 493 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 ETF1P62495 437 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 DMWDQ09019 674 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 C17orf67Q0P5P2 114 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 TCF15Q12870 199 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 NUMA1Q14980 2115 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 RBBP5Q15291 538 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 PCBP2Q15366 365 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHD6-201ENST00000309279 SIX1Q15475 284 aaPredicted RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 CST6Q15828 149 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 LONRF2Q1L5Z9 754 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 INAVAQ3KP66 663 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 TEX44Q53QW1 395 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 RALGPS1Q5JS13 557 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 ZNF776Q68DI1 518 aaPredicted RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 MRM1Q6IN84 353 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 C16orf46Q6P387 395 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 DSG4Q86SJ6 1040 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 WDR5BQ86VZ2 330 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 LONP2Q86WA8 852 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 MMAAQ8IVH4 418 aaKnown RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 GALNT12Q8IXK2 581 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 ABCA7Q8IZY2 2146 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 BBS5Q8N3I7 341 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 PGBD5Q8N414 524 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 RFWD2Q8NHY2 731 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 CEP76Q8TAP6 659 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 SLC35B2Q8TB61 432 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 PRCCQ92733 491 aaPredicted RBP8.24□□□□□ -1.09
CHD6-201ENST00000309279 KIAA1191Q96A73 305 aa8.24□□□□□ -1.09
CHD6-201ENST00000309279 HAUS1Q96CS2 278 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms