RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GPR17Q13304 367 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 IRF5Q13568 498 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 TERF2Q15554 542 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM153CQ494X1 144 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 FOXR2Q6PJQ5 311 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 KDM7AQ6ZMT4 941 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 PMEPA1Q969W9 287 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 TBATAQ96M53 351 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 JMJD7P0C870 316 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 RPL4P36578 427 aaKnown RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 NAA20P61599 178 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 TAF1AQ15573 450 aaPredicted RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 TYW3Q6IPR3 259 aaKnown RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 CERS6Q6ZMG9 384 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 GAL3ST4Q96RP7 486 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 PTPN18Q99952 460 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 SNX15Q9NRS6 342 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 FBXW2Q9UKT8 454 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 DUSP12Q9UNI6 340 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 H3BQ06 376 aaPredicted RBP10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 CCL22O00626 93 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 ARRB1P49407 418 aaPredicted RBP10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 TBCELQ5QJ74 424 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 SYPL2Q5VXT5 272 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 TMEM245Q9H330 911 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 LRRC19Q9H756 370 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 SEMA3GQ9NS98 782 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 C2CD4BA6NLJ0 364 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 TK2O00142 265 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 PFDN1O60925 122 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 CALB2P22676 271 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF132P52740 706 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 KCTD13Q8WZ19 329 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 PIGKQ92643 395 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 CAVIN3Q969G5 261 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 FAXDC2Q96IV6 333 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 GPR21Q99679 349 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 RGS17Q9UGC6 210 aaPredicted RBP10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 CORO2BQ9UQ03 480 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 ANGPT4Q9Y264 503 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 LYVE1Q9Y5Y7 322 aa10.65□□□□□ -0.71
SYNPO2-201ENST00000307142 VARSP26640 1264 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 IL12BP29460 328 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 PGDP52209 483 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 CST9Q5W186 159 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 GSDMCQ9BYG8 508 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 ATG10Q9H0Y0 220 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 SLC2A4RGQ9NR83 387 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 KLC4Q9NSK0 619 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 ADAMTS3O15072 1205 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 LAPTM5Q13571 262 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 INTS11Q5TA45 600 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 SH3PXD2AQ5TCZ1 1133 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 TTC33Q6PID6 262 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 EPHX4Q8IUS5 362 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF567Q8N184 647 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 STRADBQ9C0K7 418 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 DNAJC11Q9NVH1 559 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 NFKBIL1Q9UBC1 381 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 AK5Q9Y6K8 562 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 NID2Q14112 1375 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 MRASO14807 208 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 HSMCR30P0CW71 290 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 CASRP41180 1078 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 BNC1Q01954 994 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 TCHHL1Q5QJ38 904 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF852Q6ZMS4 543 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 STK32AQ8WU08 396 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 NCSTNQ92542 709 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF75CPQ92670 426 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 C1orf50Q9BV19 199 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 ELAC1Q9H777 363 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 FLRT1Q9NZU1 646 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 DCXO43602 365 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 AP2A1O95782 977 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 HNRNPA1P09651 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 LRPAP1P30533 357 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 MAPKAPK3Q16644 382 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 UGT2B28Q9BY64 529 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 CHRAC1Q9NRG0 131 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 MORC2Q9Y6X9 1032 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 HCRTO43612 131 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 LIPMQ5VYY2 423 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 TRIM40Q6P9F5 258 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 GCNT7Q6ZNI0 430 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 CREG2Q8IUH2 290 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 PTCD2Q8WV60 388 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 S100A13Q99584 98 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 PNO1Q9NRX1 252 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 FKBPLQ9UIM3 349 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 COG5Q9UP83 839 aa10.64□□□□□ -0.71
SYNPO2-201ENST00000307142 BCLAF3A2AJT9 711 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ATG7O95352 703 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 STXBP1P61764 594 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 POU5F1Q01860 360 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 PON2Q15165 354 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF549Q6P9A3 640 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 OR52L1Q8NGH7 329 aa10.63□□□□□ -0.71
SYNPO2-201ENST00000307142 C8orf48Q96LL4 319 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms