RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 A0A088AWK7 358 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 LATS1O95835 1130 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 SRCP12931 536 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 PKMP14618 531 aaKnown RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 ITGAXP20702 1163 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 IMPDH1P20839 514 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 BMPR1AP36894 532 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 NME5P56597 212 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 SH3BP2P78314 561 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 CAMK1Q14012 370 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 C18orf21Q32NC0 220 aaPredicted RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 PITRM1Q5JRX3 1037 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 ICE2Q659A1 982 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 FAM109BQ6ICB4 259 aaPredicted RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 RIPOR1Q6ZS17 1223 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 FAM217AQ8IXS0 508 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 C7orf61Q8IZ16 206 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 RNF148Q8N7C7 305 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 CFAP61Q8NHU2 1237 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 FIBINQ8TAL6 211 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 SPPL3Q8TCT6 385 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 BBS2Q9BXC9 721 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ZFYVE1Q9HBF4 777 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 SEMA4BQ9NPR2 832 aaPredicted RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 COPG1Q9Y678 874 aaKnown RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 PRSS21Q9Y6M0 314 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 E5RI56 91 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 CFLARO15519 480 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 SMIM24O75264 130 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ECI2O75521 394 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 TM7SF2O76062 418 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 PRAMEF1O95521 474 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 HSPA8P11142 646 aaKnown RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 CES1P23141 567 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ATXN3P54252 364 aaPredicted RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 WASHC2DQ5SRD0 308 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 C1orf146Q5VVC0 180 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 Q6ZVU0 165 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 HPS6Q86YV9 775 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ZNF366Q8N895 744 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 CHST14Q8NCH0 376 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 GRIN3AQ8TCU5 1115 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 CYB5D2Q8WUJ1 264 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 CMTM5Q96DZ9 223 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 LINGO1Q96FE5 620 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 C3orf30Q96M34 536 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ATOH8Q96SQ7 321 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 RAD9AQ99638 391 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ZDHHC6Q9H6R6 413 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 INTS10Q9NVR2 710 aaKnown RBP11.32□□□□□ -0.6
SCG2-201ENST00000305409 SORCS3Q9UPU3 1222 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 TRAF6Q9Y4K3 522 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 ASB1Q9Y576 335 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 SLC30A1Q9Y6M5 507 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 WASF2Q9Y6W5 498 aa11.32□□□□□ -0.6
SCG2-201ENST00000305409 EIF4E1BA6NMX2 242 aaKnown RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 C9JVG2 144 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 EEF1DP29692 281 aaKnown RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 PRDX3P30048 256 aaKnown RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 NUDT2P50583 147 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 TBCCQ15814 346 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 CCDC6Q16204 474 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 SCIMPQ6UWF3 145 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 GK5Q6ZS86 529 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 LKAAEAR1Q8TD35 194 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 ASB8Q9H765 288 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 IL26Q9NPH9 171 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 TRMT6Q9UJA5 497 aaKnown RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 RIMKLBQ9ULI2 386 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 PLXNA4Q9HCM2 1894 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 KIAA1671Q9BY89 1806 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 A0A0J9YYE9 177 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 NPIPB15A6NHN6 443 aaPredicted RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 GAPDHSO14556 408 aaPredicted RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 CDK14O94921 469 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 TRBC1P01850 177 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 CYBBP04839 570 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 UGT2B4P06133 528 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 EZRP15311 586 aaKnown RBP11.31□□□□□ -0.6
SCG2-201ENST00000305409 BPIP17213 487 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 HMGCLP35914 325 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 TTPAP49638 278 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 SUOXP51687 545 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 AP1S1P61966 158 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 HERVK_113P63132 956 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 CREMQ03060 361 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 RAD51Q06609 339 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 PPIGQ13427 754 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCG2-201ENST00000305409 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 CYHR1Q6ZMK1 362 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 DPY19L3Q6ZPD9 716 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 SERPINA9Q86WD7 417 aa11.31□□□□□ -0.6
SCG2-201ENST00000305409 SLC22A9Q8IVM8 553 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms