RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PREPLQ4J6C6 727 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 PRSS36Q5K4E3 855 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 DGKKQ5KSL6 1271 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 C22orf39Q6P5X5 142 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 TXNDC11Q6PKC3 985 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CHSY3Q70JA7 882 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 SNX20Q7Z614 316 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ULK2Q8IYT8 1036 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 EID2BQ96D98 161 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 TCEAL4Q96EI5 215 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 MTIF3Q9H2K0 278 aaKnown RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ACSS2Q9NR19 701 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 DPP7Q9UHL4 492 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 FAM50BQ9Y247 325 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 MTF2Q9Y483 593 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ALPK3Q96L96 1907 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 NEMP1O14524 444 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 SUPT7LO94864 414 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 PRAMEF12O95522 483 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ZNF7P17097 686 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CTPS1P17812 591 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ITGALP20701 1170 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 MYLK3Q32MK0 819 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 FUT11Q495W5 492 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 GPR33Q49SQ1 333 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 GRAMD4Q6IC98 578 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 PDE12Q6L8Q7 609 aaKnown RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 KIAA0907Q7Z7F0 614 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CLYBLQ8N0X4 340 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 PELI3Q8N2H9 469 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CD200R1Q8TD46 325 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 IRF7Q92985 503 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 FAM161BQ96MY7 647 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ANKRD27Q96NW4 1050 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 SLC2A11Q9BYW1 496 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 SMG9Q9H0W8 520 aaKnown RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ZDHHC7Q9NXF8 308 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 RNF112Q9ULX5 631 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CCL26Q9Y258 94 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 TRAF6Q9Y4K3 522 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 LINC01553A4QN01 128 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 CCNT2O60583 730 aaKnown RBP19.29■□□□□ 0.68
HOXC4-201ENST00000303406 CLASP2O75122 1294 aaKnown RBP19.29■□□□□ 0.68
HOXC4-201ENST00000303406 TSPAN12O95859 305 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 ALPIP09923 528 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 PABPC1P11940 636 aaKnown RBP19.29■□□□□ 0.68
HOXC4-201ENST00000303406 HNF1BP35680 557 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 IL2P60568 153 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 IRX1P78414 480 aaPredicted RBP19.29■□□□□ 0.68
HOXC4-201ENST00000303406 ELMSAN1Q6PJG2 1045 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 TAS2R42Q7RTR8 314 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 RBFAQ8N0V3 343 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 RYBPQ8N488 228 aaPredicted RBP19.29■□□□□ 0.68
HOXC4-201ENST00000303406 TTC16Q8NEE8 873 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 VOPP1Q96AW1 172 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 ZNF641Q96N77 438 aaPredicted RBP19.29■□□□□ 0.68
HOXC4-201ENST00000303406 THTPAQ9BU02 230 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 OSBPL1AQ9BXW6 950 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 SHCBP1LQ9BZQ2 653 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 SPHK2Q9NRA0 654 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 DHRS7Q9Y394 339 aa19.29■□□□□ 0.68
HOXC4-201ENST00000303406 C1orf232A0A0U1RR37 186 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 TMEM233B4DJY2 109 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 WASH3PC4AMC7 463 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 UBXN8O00124 270 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 GAPDHSO14556 408 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 ZNF197O14709 1029 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 NIPSNAP2O75323 286 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 ENTPD5O75356 428 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 RFPL2O75678 378 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 JUNP05412 331 aaKnown RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 RPS17P08708 135 aaKnown RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 GCKP35557 465 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 SPAM1P38567 509 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 VASPP50552 380 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 CDC16Q13042 620 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 KPNB1Q14974 876 aaKnown RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 CARD16Q5EG05 197 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 ACSBG2Q5FVE4 666 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 ZDHHC20Q5W0Z9 365 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 ICE2Q659A1 982 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 PGM2L1Q6PCE3 622 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 TPRG1Q6ZUI0 275 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 TMEM25Q86YD3 366 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 FBXO39Q8N4B4 442 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 POU5F2Q8N7G0 328 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 RIN3Q8TB24 985 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 LENG8Q96PV6 779 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 MCCC1Q96RQ3 725 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-201ENST00000303406 SUV39H2Q9H5I1 410 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 ZBTB26Q9HCK0 441 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 NDE1Q9NXR1 346 aa19.28■□□□□ 0.68
HOXC4-201ENST00000303406 A0A088AWK7 358 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 AGAP14A8MT82 685 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 E5RI56 91 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 UBFD1O14562 309 aaKnown RBP19.27■□□□□ 0.68
HOXC4-201ENST00000303406 SLC9A3R1O14745 358 aaPredicted RBP19.27■□□□□ 0.68
HOXC4-201ENST00000303406 OR1I1O60431 355 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 ECI2O75521 394 aa19.27■□□□□ 0.68
HOXC4-201ENST00000303406 POP4O95707 220 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms