RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IGLV3-27P01718 113 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 CAPNS1P04632 268 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 CES1P23141 567 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 SLC26A3P40879 764 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 NFKB2Q00653 900 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 C8orf82Q6P1X6 216 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 SPPL2CQ8IUH8 684 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 PLEKHG4BQ96PX9 1271 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 BPIFA1Q9NP55 256 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 PCDHGC4Q9Y5F7 938 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 TCRBV3S1A0A5B6 114 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 FAM92AA1XBS5 289 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 NPEPPSL1A6NEC2 478 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 INPPL1O15357 1258 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 AKAP10O43572 662 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 NDST3O95803 873 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 RPL10P27635 214 aaKnown RBP12.83□□□□□ -0.35
HIF3A-204ENST00000300862 MAGEA11P43364 429 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 CREB5Q02930 508 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 CLCQ05315 142 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 RPS6KA2Q15349 733 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 FAM26DQ5JW98 314 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 DUS1LQ6P1R4 473 aaKnown RBP12.83□□□□□ -0.35
HIF3A-204ENST00000300862 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-204ENST00000300862 PHYKPLQ8IUZ5 450 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 FBXO39Q8N4B4 442 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 VPS33AQ96AX1 596 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 TEX37Q96LM6 180 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF512Q96ME7 567 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-204ENST00000300862 GPR21Q99679 349 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF510Q9Y2H8 683 aa12.83□□□□□ -0.35
HIF3A-204ENST00000300862 SAC3D1A6NKF1 404 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 PLOD2O00469 737 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 ECI2O75521 394 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 CRCPO75575 148 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 RPLP2P05387 115 aaKnown RBP12.83□□□□□ -0.36
HIF3A-204ENST00000300862 PSMC3P17980 439 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 SLC7A1P30825 629 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 ACADVLP49748 655 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 GALK1P51570 392 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 SGSHP51688 502 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 YBEYP58557 167 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-204ENST00000300862 GNA12Q03113 381 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 PTPRNQ16849 979 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 RTP2Q5QGT7 225 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-204ENST00000300862 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 IFNEQ86WN2 208 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 PIANPQ8IYJ0 282 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 MIER2Q8N344 545 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 EFHBQ8N7U6 833 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 GPR150Q8NGU9 434 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 TRIB3Q96RU7 358 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 ACOX2Q99424 681 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 NACA2Q9H009 215 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 TIMMDC1Q9NPL8 285 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 MRPL40Q9NQ50 206 aaKnown RBP12.83□□□□□ -0.36
HIF3A-204ENST00000300862 OLA1Q9NTK5 396 aaKnown RBP12.83□□□□□ -0.36
HIF3A-204ENST00000300862 ASB1Q9Y576 335 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
HIF3A-204ENST00000300862 TMEM88BA6NKF7 163 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TMEM189-UBE2V1I3L0A0 370 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 BTN3A1O00481 513 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 ANGPT2O15123 496 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 NDUFS3O75489 264 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 GJB5O95377 273 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SUOXP51687 545 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 ACLYP53396 1101 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TRAP1Q12931 704 aaKnown RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 KANK2Q63ZY3 851 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 BORAQ6PGQ7 559 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 DENND1CQ8IV53 801 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SLC15A3Q8IY34 581 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 ABI1Q8IZP0 508 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 PCYOX1LQ8NBM8 494 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 LPCAT1Q8NF37 534 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CINPQ9BW66 212 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SLC2A11Q9BYW1 496 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CCDC68Q9H2F9 335 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CEPT1Q9Y6K0 416 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 H3BSA7 217 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 FXYD1O00168 92 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CBX4O00257 560 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 SOCS2O14508 198 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 ADAM12O43184 909 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TSPAN3O60637 253 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 NIPSNAP2O75323 286 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 FGF4P08620 206 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 RPL17P18621 184 aaKnown RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CDH2P19022 906 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 CASP2P42575 452 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 MAPKAPK2P49137 400 aa12.82□□□□□ -0.36
HIF3A-204ENST00000300862 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-204ENST00000300862 TNK2Q07912 1038 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms