RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ALKBH4Q9NXW9 302 aa13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OAS3Q9Y6K5 1087 aaKnown RBP13.52□□□□□ -0.24
CHRFAM7A-201ENST00000299847 URADA6NGE7 173 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AP2A2O94973 939 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RLN1P04808 185 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CYP2C18P33260 490 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC25A52Q3SY17 297 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 JAZF1Q86VZ6 243 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SIDT2Q8NBJ9 832 aaKnown RBP13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZCCHC10Q8TBK6 192 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FAM192AQ9GZU8 254 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C11orf16Q9NQ32 467 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 REP15Q6BDI9 236 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ARCQ7LC44 396 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZBTB2Q8N680 514 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF248Q8NDW4 579 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PIK3C3Q8NEB9 887 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KLK6Q92876 244 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IKZF2Q9UKS7 526 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RAI2Q9Y5P3 530 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 USP32Q8NFA0 1604 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CCDC85CA6NKD9 419 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C1RP00736 705 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MMP3P08254 477 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ABHD2P08910 425 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SAGP10523 405 aaPredicted RBP13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CLCNKBP51801 687 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 POLR2JP52435 117 aaKnown RBP13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC1A5Q15758 541 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KCNA10Q16322 511 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PLPPR4Q7Z2D5 763 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TRPV3Q8NET8 790 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TWIST2Q8WVJ9 160 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C1GALT1C1Q96EU7 318 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GPR21Q99679 349 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FBXW2Q9UKT8 454 aa13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TTC24A2A3L6 582 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CHRM5P08912 532 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HSPA7P48741 367 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CAMK1Q14012 370 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PIK3R6Q5UE93 754 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CEP68Q76N32 757 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CHST9Q7L1S5 443 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CSPG4P5Q96PW8 444 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ACSS3Q9H6R3 686 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GLOD4Q9HC38 313 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KIAA1522Q9P206 1035 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KCNE2Q9Y6J6 123 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LOC110117498-PIK3R3F6TDL0 507 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CACNB4O00305 520 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 STX16O14662 325 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GNB5O14775 395 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SERPINB7O75635 380 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RNASEH2AO75792 299 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BPGMP07738 259 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GRM5P41594 1212 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SEPHS1P49903 392 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C2orf80Q0P641 193 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BNIP2Q12982 314 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HSPB3Q12988 150 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ANXA8L1Q5VT79 327 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BHLHB9Q6PI77 547 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NAPRTQ6XQN6 538 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AMER2Q8N7J2 671 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FAM110BQ8TC76 370 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ESAMQ96AP7 390 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ABCG4Q9H172 646 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC27A6Q9Y2P4 619 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 REXO2Q9Y3B8 237 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BIRC5O15392 142 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TREHO43280 583 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ERN1O75460 977 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MAT2AP31153 395 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GBE1Q04446 702 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ANKRD22Q5VYY1 191 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CCSAPQ6IQ19 270 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LIN54Q6MZP7 749 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CFAP206Q8IYR0 622 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GPER1Q99527 375 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SEMA3GQ9NS98 782 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TMEM51Q9NW97 253 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HAT1O14929 419 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SNAP91O60641 907 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPP40O75818 363 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NADKO95544 446 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF135P52742 658 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZBTB6Q15916 424 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PITRM1Q5JRX3 1037 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OTOP2Q7RTS6 562 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OR2T12Q8NG77 320 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF398Q8TD17 642 aa13.51□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TSEN15Q8WW01 171 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms