RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SARDHQ9UL12 918 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 NUMBLQ9Y6R0 609 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 XIRP2A4UGR9 3374 aa22.71■■□□□ 1.23
PTX3-201ENST00000295927 ANTXRLA6NF34 631 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 ITM2AO43736 263 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 TRIM13O60858 407 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 PRNPP04156 253 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 ZNF37AP17032 561 aaPredicted RBP22.7■■□□□ 1.23
PTX3-201ENST00000295927 IGFBP4P22692 258 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 PPARGP37231 505 aaPredicted RBP22.7■■□□□ 1.23
PTX3-201ENST00000295927 SLC1A6P48664 564 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 ACAP2Q15057 778 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 LRIT3Q3SXY7 679 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 SERPINA13PQ6UXR4 307 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 RFWD2Q8NHY2 731 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 SREK1Q8WXA9 508 aaKnown RBP22.7■■□□□ 1.23
PTX3-201ENST00000295927 OR8D1Q8WZ84 308 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 NECTIN4Q96NY8 510 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 TRIM55Q9BYV6 548 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 HCN2Q9UL51 889 aa22.7■■□□□ 1.23
PTX3-201ENST00000295927 TICRRQ7Z2Z1 1910 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 PLXNB3Q9ULL4 1909 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 KPNA3O00505 521 aaPredicted RBP22.7■■□□□ 1.22
PTX3-201ENST00000295927 LYPLA1O75608 230 aaPredicted RBP22.7■■□□□ 1.22
PTX3-201ENST00000295927 ESR1P03372 595 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 ZNF30P17039 623 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 POU3F3P20264 500 aaPredicted RBP22.7■■□□□ 1.22
PTX3-201ENST00000295927 GRIA2P42262 883 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 SPINT3P49223 89 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 GPR33Q49SQ1 333 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 C10orf82Q8WW14 230 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 CCDC97Q96F63 343 aaPredicted RBP22.7■■□□□ 1.22
PTX3-201ENST00000295927 TTC1Q99614 292 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 EPS15L1Q9UBC2 864 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 CRLS1Q9UJA2 301 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 COMMD10Q9Y6G5 202 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 BRWD1Q9NSI6 2320 aa22.7■■□□□ 1.22
PTX3-201ENST00000295927 PRMT5O14744 637 aaPredicted RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 DLX3O60479 287 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 NIPSNAP2O75323 286 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 XPAP23025 273 aaPredicted RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 NFKBIAP25963 317 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 ACRV1P26436 265 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 IL12RB1P42701 662 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 LYPLAL1Q5VWZ2 237 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PAQR3Q6TCH7 311 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 NAPRTQ6XQN6 538 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PARS2Q7L3T8 475 aaKnown RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 CRLF3Q8IUI8 442 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 MICALL1Q8N3F8 863 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 SGF29Q96ES7 293 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PLEKHG4BQ96PX9 1271 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 GPR21Q99679 349 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PLCD4Q9BRC7 762 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 ZDHHC4Q9NPG8 344 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 THAP10Q9P2Z0 257 aaPredicted RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 GALPQ9UBC7 116 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 DCTN4Q9UJW0 460 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 OAS3Q9Y6K5 1087 aaKnown RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 VPS26AO75436 327 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 RBP1P09455 135 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 ZNF7P17097 686 aaPredicted RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 TFEBP19484 476 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 CD9P21926 228 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 SOX9P48436 509 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 HTR4Q13639 388 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 GLIPR1L2Q4G1C9 344 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PREPLQ4J6C6 727 aaPredicted RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 LIPMQ5VYY2 423 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 ZDHHC20Q5W0Z9 365 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 ATG14Q6ZNE5 492 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 TMIEQ8NEW7 156 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 RMDN2Q96LZ7 410 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 FAM129BQ96TA1 746 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 SYTL2Q9HCH5 934 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 FBRSL1Q9HCM7 1045 aaKnown RBP22.69■■□□□ 1.22
PTX3-201ENST00000295927 PKD2L2Q9NZM6 624 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PPM1HQ9ULR3 514 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 PCDHB1Q9Y5F3 818 aa22.69■■□□□ 1.22
PTX3-201ENST00000295927 CCT8L1PA6NM43 557 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 AGAP14A8MT82 685 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 H2AFYO75367 372 aaKnown RBP22.68■■□□□ 1.22
PTX3-201ENST00000295927 APODP05090 189 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 PYGLP06737 847 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 CD1DP15813 335 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 ARRB2P32121 409 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 METAP1P53582 386 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 ABCE1P61221 599 aaKnown RBP22.68■■□□□ 1.22
PTX3-201ENST00000295927 ELAVL3Q14576 367 aaKnown RBP22.68■■□□□ 1.22
PTX3-201ENST00000295927 EGFLAMQ63HQ2 1017 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 DPPA4Q7L190 304 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 RBFAQ8N0V3 343 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 PIP4K2CQ8TBX8 421 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 SUSD6Q92537 303 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 ACOX2Q99424 681 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 BOCQ9BWV1 1114 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 GATA5Q9BWX5 397 aaPredicted RBP22.68■■□□□ 1.22
PTX3-201ENST00000295927 USH1CQ9Y6N9 552 aa22.68■■□□□ 1.22
PTX3-201ENST00000295927 ANHXE9PGG2 379 aa22.67■■□□□ 1.22
PTX3-201ENST00000295927 ZBTB14O43829 449 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms