RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SPATA22Q8NHS9 363 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 KIFC1Q9BW19 673 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 CRISPLD1Q9H336 500 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 ALOX15BO15296 676 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 SLC31A1O15431 190 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 SNX3O60493 162 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 KLHL24Q6TFL4 600 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 PROSER1Q86XN7 944 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-201ENST00000293441 KREMEN2Q8NCW0 462 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 KLK6Q92876 244 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 ZNF214Q9UL59 606 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-201ENST00000293441 LRCH1Q9Y2L9 728 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 ENPP3O14638 875 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 PLD4Q96BZ4 506 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 APOLD1Q96LR9 279 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CDADC1Q9BWV3 514 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 EPB41L1Q9H4G0 881 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ERVK-5Q9HDB9 667 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 EXD2Q9NVH0 621 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 RCOR3Q9P2K3 495 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 SLC17A7Q9P2U7 560 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 MRC1P22897 1456 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 PNMA8CA0A1B0GUJ8 204 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 INSIG1O15503 277 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 SUV39H1O43463 412 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 PRMT3O60678 531 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 SERPINA6P08185 405 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CMPK1P30085 196 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CDH5P33151 784 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 HNMTP50135 292 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 PEG10Q86TG7 708 aaKnown RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ALG3Q92685 438 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 HBS1LQ9Y450 684 aaKnown RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 STON1Q9Y6Q2 735 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 SLIT3O75094 1523 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 KCNU1A8MYU2 1149 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CCNCP24863 283 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 DGKGP49619 791 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ZNF155Q12901 538 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ATP6V1C2Q8NEY4 427 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ZNF184Q99676 751 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CYP4B1P13584 511 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 MPSTP25325 297 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ADAMTS15Q8TE58 950 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ATG10Q9H0Y0 220 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 MRPS7Q9Y2R9 242 aaKnown RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 LRRC72A6NJI9 287 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 CCL22O00626 93 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 POP4O95707 220 aaKnown RBP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 C2orf80Q0P641 193 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 BNIP2Q12982 314 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 NEK5Q6P3R8 708 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 HIPK1Q86Z02 1210 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ADCY4Q8NFM4 1077 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 KLHL32Q96NJ5 620 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 QKIQ96PU8 341 aaKnown RBP eCLIP17.21■□□□□ 0.35
SHANK1-201ENST00000293441 ELOVL2Q9NXB9 296 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 SATB2Q9UPW6 733 aa17.21■□□□□ 0.35
SHANK1-201ENST00000293441 MPP1Q00013 466 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 GAD2Q05329 585 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 EPS8Q12929 822 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 LRRC73Q5JTD7 316 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 FBXW8Q8N3Y1 598 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 NXNL1Q96CM4 212 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 B3GALT6Q96L58 329 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 HEPHQ9BQS7 1158 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 FAM83DQ9H4H8 585 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 EHD3Q9NZN3 535 aa17.21■□□□□ 0.34
SHANK1-201ENST00000293441 CA12O43570 354 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 CD48P09326 243 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 AQP1P29972 269 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 SP2Q02086 613 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 TIMM50Q3ZCQ8 353 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 DEPDC4Q8N2C3 294 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 C22orf31O95567 290 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 TPSB2P20231 275 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 DRG2P55039 364 aaKnown RBP17.2■□□□□ 0.34
SHANK1-201ENST00000293441 SRP54P61011 504 aaKnown RBP17.2■□□□□ 0.34
SHANK1-201ENST00000293441 TEAD4Q15561 434 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 TBATAQ96M53 351 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 C3orf18Q9UK00 162 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 PSMD11O00231 422 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 RCVRNP35243 200 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 FBXO48Q5FWF7 155 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-201ENST00000293441 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 MYDGFQ969H8 173 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
SHANK1-201ENST00000293441 CLEC4MQ9H2X3 399 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-201ENST00000293441 LRTM1Q9HBL6 345 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 LRRC4CQ9HCJ2 640 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 A0A0J9YYE9 177 aa17.2■□□□□ 0.34
SHANK1-201ENST00000293441 LRCH4O75427 683 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms