RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 HIC2Q96JB3 615 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 TBATAQ96M53 351 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 QKIQ96PU8 341 aaKnown RBP eCLIP9.72□□□□□ -0.857e-10■■■■□ 23.6
CCDC58-201ENST00000291458 GFM1Q96RP9 751 aaKnown RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 SPATA16Q9BXB7 569 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 TEX101Q9BY14 249 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ADGRE3Q9BY15 652 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 GSDMCQ9BYG8 508 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 GPR63Q9BZJ6 419 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 SLC25A51Q9H1U9 297 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 BPIFA1Q9NP55 256 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 AMACRQ9UHK6 382 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 RSPH14Q9UHP6 348 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 DNPEPQ9ULA0 475 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ATXN7L1Q9ULK2 861 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 SATB2Q9UPW6 733 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 PPIL1Q9Y3C6 166 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 OAS3Q9Y6K5 1087 aaKnown RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 DGKBQ9Y6T7 804 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 RNF215Q9Y6U7 377 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 APC2O95996 2303 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ACACAQ13085 2346 aa9.71□□□□□ -0.85
CCDC58-201ENST00000291458 FADS2P1A8MWK0 482 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 GOLGA6L6A8MZA4 724 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TNFRSF10CO14798 259 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 PJA2O43164 708 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 SIAH2O43255 324 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 BUD23O43709 281 aaKnown RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 NOBOXO60393 691 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 MTX2O75431 263 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ACP5P13686 325 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 HGFP14210 728 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 RBL1P28749 1068 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 CTNNA1P35221 906 aaKnown RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ADCY8P40145 1251 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TNNT3P45378 269 aaPredicted RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 SPINT3P49223 89 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 PDX1P52945 283 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 CTBSQ01459 385 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 OTUD4Q01804 1114 aaKnown RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 CDK18Q07002 472 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 WASHC5Q12768 1159 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 OLIG2Q13516 323 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ISXQ2M1V0 245 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 MAP9Q49MG5 647 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 C14orf28Q4W4Y0 310 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TEX44Q53QW1 395 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ZNF569Q5MCW4 686 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ADAMTSL4Q6UY14 1074 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 BBS12Q6ZW61 710 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 PID1Q7Z2X4 250 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 NRROSQ86YC3 692 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 GALNT13Q8IUC8 556 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 CCNJLQ8IV13 435 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TMEM139Q8IV31 216 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ZNF567Q8N184 647 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TAB3Q8N5C8 712 aaPredicted RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 EXD1Q8NHP7 514 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 SNIP1Q8TAD8 396 aaKnown RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ACTL9Q8TC94 416 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 BLOC1S5Q8TDH9 187 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 HTR3CQ8WXA8 447 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ALG3Q92685 438 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TRIB3Q96RU7 358 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 APOL2Q9BQE5 337 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 FICDQ9BVA6 458 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 CDH19Q9H159 772 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 SPATS2LQ9NUQ6 558 aaKnown RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 TAAR2Q9P1P5 351 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 ZNHIT2Q9UHR6 403 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 KCNK6Q9Y257 313 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 SPO11Q9Y5K1 396 aa9.71□□□□□ -0.86
CCDC58-201ENST00000291458 PCYT1BQ9Y5K3 369 aaPredicted RBP9.71□□□□□ -0.86
CCDC58-201ENST00000291458 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
CCDC58-201ENST00000291458 SPEGQ15772 3267 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 RHPN2P1A8MT19 583 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 ANKRD66B4E2M5 251 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 D6RAR5 112 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 AURKAO14965 403 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 GPR39O43194 453 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 SNX2O60749 519 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 ECEL1O95672 775 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 NDST3O95803 873 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 IVLP07476 585 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 HOXC4P09017 264 aaPredicted RBP9.7□□□□□ -0.86
CCDC58-201ENST00000291458 ITPKBP27987 946 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 ALDH4A1P30038 563 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 NR2C2P49116 596 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 WNT3AP56704 352 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 RWDD2BP57060 319 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 EIF3EP60228 445 aaKnown RBP9.7□□□□□ -0.86
CCDC58-201ENST00000291458 RPL26P61254 145 aaKnown RBP9.7□□□□□ -0.86
CCDC58-201ENST00000291458 DPTQ07507 201 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 PPP2R5EQ16537 467 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 TAZQ16635 292 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 HENMT1Q5T8I9 393 aaKnown RBP9.7□□□□□ -0.86
CCDC58-201ENST00000291458 CCDC70Q6NSX1 233 aa9.7□□□□□ -0.86
CCDC58-201ENST00000291458 LVRNQ6Q4G3 990 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms