RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ARFGAP2Q8N6H7 521 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 IER2Q9BTL4 223 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 ABCG8Q9H221 673 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 RHOJQ9H4E5 214 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 PREBQ9HCU5 417 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 CD93Q9NPY3 652 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 FBXO6Q9NRD1 293 aaPredicted RBP18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 INTS10Q9NVR2 710 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 TRBV5-4A0A0C4DH59 114 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 IGLON5A6NGN9 336 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 PFDN6O15212 129 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 TM7SF2O76062 418 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 IGLV3-19P01714 112 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 ITGA2BP08514 1039 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 SNRPAP09012 282 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 UGT1A6P19224 532 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 UGT1A1P22309 533 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 UGT1A4P22310 534 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 UGT1A3P35503 534 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 UGT1A5P35504 534 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 CD151P48509 253 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 LIMK2P53671 638 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 ATP13A5Q4VNC0 1218 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 NEK5Q6P3R8 708 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 FAM124AQ86V42 546 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 TRAM1L1Q8N609 369 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 AP2M1Q96CW1 435 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 MTBPQ96DY7 904 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 NUS1Q96E22 293 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 ZSCAN5AQ9BUG6 496 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 RIOK2Q9BVS4 552 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 SPATA16Q9BXB7 569 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 KCTD5Q9NXV2 234 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 VPS9D1Q9Y2B5 631 aa18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 ZNF106Q9H2Y7 1883 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3DA0A087WVF3 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3IA0A087WXS9 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3EA0A087X179 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3KA0A087X1G2 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3FA6NER0 549 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3LB9A6J9 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TRIM49D1C9J1S8 452 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3HP0C7X1 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 BRAFP15056 766 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 MAGEA9P43362 315 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 RPS21P63220 83 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 AGERQ15109 404 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 ZNF284Q2VY69 593 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 ZNF789Q5FWF6 425 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 RNF187Q5TA31 235 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 MROH9Q5TGP6 573 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 CWF19L1Q69YN2 538 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3GQ6DHY5 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3CQ6IPX1 549 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 KIAA1161Q6NSJ0 714 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 CNSTQ6PJW8 725 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 NLRP8Q86W28 1048 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TBC1D3Q8IZP1 549 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 VPS39Q96JC1 886 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 TTC1Q99614 292 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 BTBD1Q9H0C5 482 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 SGK2Q9HBY8 427 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 CRLS1Q9UJA2 301 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 ZFR2Q9UPR6 939 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 NDUFS3O75489 264 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 APBB3O95704 486 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 PDGFBP01127 241 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 ACSL1P33121 698 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 CA5AP35218 305 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 PPARGP37231 505 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 DPTQ07507 201 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 ILF2Q12905 390 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 BMPR2Q13873 1038 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 LYPLAL1Q5VWZ2 237 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 SEL1L3Q68CR1 1132 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 MAMSTRQ6ZN01 415 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 SH2D5Q6ZV89 423 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 SERPINA9Q86WD7 417 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 CAMKK1Q8N5S9 505 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 ATXN7L3BQ96GX2 97 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 SERAC1Q96JX3 654 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 CNOT10Q9H9A5 744 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 DLGAP2Q9P1A6 1054 aa18.78■□□□□ 0.6
PDLIM3-202ENST00000284770 A0A1W2PQU0 124 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 RNGTTO60942 597 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 ACRV1P26436 265 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 ABCG1P45844 678 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 MAP7D1Q3KQU3 841 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 TMEM259Q4ZIN3 620 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 SETMARQ53H47 684 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 HORMAD1Q86X24 394 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 C4orf33Q8N1A6 199 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 NXPE1Q8N323 547 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 LPGAT1Q92604 370 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 ULK4Q96C45 1275 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 SELENOSQ9BQE4 189 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 C1QTNF2Q9BXJ5 285 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 SMOXQ9NWM0 555 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 CRYL1Q9Y2S2 319 aa18.77■□□□□ 0.6
PDLIM3-202ENST00000284770 MTO1Q9Y2Z2 717 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms