RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ZNF37AP17032 561 aaPredicted RBP16.27■□□□□ 0.19
TPM1-201ENST00000267996 RPS3P23396 243 aaKnown RBP eCLIP16.27■□□□□ 0.19
TPM1-201ENST00000267996 CA5AP35218 305 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 PPARGP37231 505 aaPredicted RBP16.27■□□□□ 0.19
TPM1-201ENST00000267996 SF3A3Q12874 501 aaKnown RBP eCLIP16.27■□□□□ 0.199e-9■■■■□ 23.4
TPM1-201ENST00000267996 ITGA9Q13797 1035 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 ACAP2Q15057 778 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 SPNS2Q8IVW8 549 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 SPATA6LQ8N4H0 392 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 C10orf82Q8WW14 230 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 PPM1HQ9ULR3 514 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 NUMBLQ9Y6R0 609 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 PRMT5O14744 637 aaPredicted RBP16.26■□□□□ 0.19
TPM1-201ENST00000267996 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
TPM1-201ENST00000267996 RBP1P09455 135 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 TROVE2P10155 538 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM1-201ENST00000267996 HLA-EP13747 358 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 RALGDSQ12967 914 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 IFT88Q13099 833 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 ELAVL3Q14576 367 aaKnown RBP16.26■□□□□ 0.19
TPM1-201ENST00000267996 LRRC73Q5JTD7 316 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 KLC3Q6P597 504 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 RFLNAQ6ZTI6 216 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 DPPA4Q7L190 304 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 PPP1R14CQ8TAE6 165 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 DTX3LQ8TDB6 740 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 OR8D1Q8WZ84 308 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 KCNJ9Q92806 393 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 FAM129BQ96TA1 746 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 TTC1Q99614 292 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 ZNF395Q9H8N7 513 aaPredicted RBP16.26■□□□□ 0.19
TPM1-201ENST00000267996 SYTL2Q9HCH5 934 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 NFKBIL1Q9UBC1 381 aaPredicted RBP16.26■□□□□ 0.19
TPM1-201ENST00000267996 SARDHQ9UL12 918 aa16.26■□□□□ 0.19
TPM1-201ENST00000267996 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 A0A1W2PPC1 479 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 ITM2AO43736 263 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 DLX3O60479 287 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 CD1DP15813 335 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 UGT1A6P19224 532 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 UGT1A1P22309 533 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 UGT1A4P22310 534 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 ACRV1P26436 265 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 UGT1A3P35503 534 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 UGT1A5P35504 534 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 SLC1A6P48664 564 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 DCDC1P59894 354 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 PFKPQ01813 784 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 OVGP1Q12889 678 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 PDAP1Q13442 181 aaKnown RBP16.25■□□□□ 0.19
TPM1-201ENST00000267996 ENPP2Q13822 863 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 ARHGEF7Q14155 803 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 SERPINA13PQ6UXR4 307 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 PARS2Q7L3T8 475 aaKnown RBP16.25■□□□□ 0.19
TPM1-201ENST00000267996 YTHDF3Q7Z739 585 aaKnown RBP16.25■□□□□ 0.19
TPM1-201ENST00000267996 TTC7BQ86TV6 843 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 ISCA2Q86U28 154 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 RBFAQ8N0V3 343 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 NXPE1Q8N323 547 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 SREK1Q8WXA9 508 aaKnown RBP16.25■□□□□ 0.19
TPM1-201ENST00000267996 GATA5Q9BWX5 397 aaPredicted RBP16.25■□□□□ 0.19
TPM1-201ENST00000267996 TRIM55Q9BYV6 548 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 NPHS2Q9NP85 383 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 PKD2L2Q9NZM6 624 aa16.25■□□□□ 0.19
TPM1-201ENST00000267996 RGSL1A5PLK6 1076 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 CCT8L1PA6NM43 557 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 TMEM114B3SHH9 223 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 APODP05090 189 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 PYGLP06737 847 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 HNRNPLP14866 589 aaKnown RBP eCLIP16.24■□□□□ 0.191e-7■■□□□ 12.2
TPM1-201ENST00000267996 ZNF7P17097 686 aaPredicted RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 ITGB7P26010 798 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 ARRB2P32121 409 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 MMP12P39900 470 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 IL12RB1P42701 662 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 RGS19P49795 217 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 DNAJB13P59910 316 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 ABCE1P61221 599 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 PAQR3Q6TCH7 311 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 NAPRTQ6XQN6 538 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 ATG14Q6ZNE5 492 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 CRLF3Q8IUI8 442 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 RFWD2Q8NHY2 731 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 SORT1Q99523 831 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 GPR21Q99679 349 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 FBRSL1Q9HCM7 1045 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 SUN2Q9UH99 717 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 CRLS1Q9UJA2 301 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 FAM50BQ9Y247 325 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 USH1CQ9Y6N9 552 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 NIPSNAP2O75323 286 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 VPS26AO75436 327 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 TFEBP19484 476 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 ATP5F1P24539 256 aaPredicted RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 SKIV2L2P42285 1042 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 EGFLAMQ63HQ2 1017 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms