RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 EEF1B2P24534 225 aaKnown RBP16.82■□□□□ 0.28
RTN1-201ENST00000267484 CYP2C18P33260 490 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 RENBPP51606 427 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 MLLT6P55198 1093 aaPredicted RBP16.82■□□□□ 0.28
RTN1-201ENST00000267484 CLCQ05315 142 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 TSNQ15631 228 aaKnown RBP16.82■□□□□ 0.28
RTN1-201ENST00000267484 PAQR3Q6TCH7 311 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 ZNF554Q86TJ5 538 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 TNIP2Q8NFZ5 429 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 FBXL8Q96CD0 374 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 RNF145Q96MT1 663 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 SMOC2Q9H3U7 446 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 MRGBPQ9NV56 204 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 RNF181Q9P0P0 153 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 GALPQ9UBC7 116 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 CDC7O00311 574 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 MUSKO15146 869 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 GLP2RO95838 553 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 ODC1P11926 461 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 ZNF182P17025 639 aaPredicted RBP16.82■□□□□ 0.28
RTN1-201ENST00000267484 FMO4P31512 558 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 RPS9P46781 194 aaKnown RBP16.82■□□□□ 0.28
RTN1-201ENST00000267484 DHRS4L2Q6PKH6 230 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 BRI3BPQ8WY22 251 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 ATOH8Q96SQ7 321 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 SEMA3CQ99985 751 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 GID8Q9NWU2 228 aa16.82■□□□□ 0.28
RTN1-201ENST00000267484 SMPD3Q9NY59 655 aaPredicted RBP16.82■□□□□ 0.28
RTN1-201ENST00000267484 RFC2P35250 354 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 ABRAXAS1Q6UWZ7 409 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 SPRED1Q7Z699 444 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 RAB44Q7Z6P3 723 aaPredicted RBP16.81■□□□□ 0.28
RTN1-201ENST00000267484 PATL1Q86TB9 770 aaKnown RBP16.81■□□□□ 0.28
RTN1-201ENST00000267484 DCP1BQ8IZD4 617 aaKnown RBP16.81■□□□□ 0.28
RTN1-201ENST00000267484 SMYD1Q8NB12 490 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 CDK15Q96Q40 435 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.81■□□□□ 0.28
RTN1-201ENST00000267484 ASB1Q9Y576 335 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 GPR45Q9Y5Y3 372 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 TCRBV5S2A0A599 114 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 TRIM64CA6NLI5 447 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 OR4D2P58180 307 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 BNIP2Q12982 314 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 PACRGLQ8N7B6 248 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 ARRDC2Q8TBH0 407 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 TANKQ92844 425 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 ACBD6Q9BR61 282 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 MTG1Q9BT17 334 aaPredicted RBP16.81■□□□□ 0.28
RTN1-201ENST00000267484 SEZ6LQ9BYH1 1024 aa16.81■□□□□ 0.28
RTN1-201ENST00000267484 ABI2Q9NYB9 513 aaPredicted RBP16.81■□□□□ 0.28
RTN1-201ENST00000267484 MATN1P21941 496 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 NR4A1P22736 598 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 CAPGP40121 348 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 DDR2Q16832 855 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 TMTC4Q5T4D3 741 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 OVOS1Q6IE37 1185 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 MIB1Q86YT6 1006 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 IGSF8Q969P0 613 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 PLEKHG4BQ96PX9 1271 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 TSPAN18Q96SJ8 248 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 RNF112Q9ULX5 631 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 A0A0U1RQS6 177 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ATP6V1G1O75348 118 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 C1RP00736 705 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 IL12AP29459 219 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ACVRL1P37023 503 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 CDKN1CP49918 316 aaPredicted RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 KCNK10P57789 538 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 TRAF2Q12933 501 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ACBD5Q5T8D3 534 aaPredicted RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 SLC2A7Q6PXP3 512 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 Q6ZNX1 250 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 METTL23Q86XA0 190 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ZC3H7AQ8IWR0 971 aaKnown RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 FBXO39Q8N4B4 442 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 OR2T11Q8NH01 316 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 TBC1D15Q8TC07 691 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 MUS81Q96NY9 551 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ANAPC2Q9UJX6 822 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 CYBBP04839 570 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 FGF4P08620 206 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ARL1P40616 181 aaPredicted RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 ZFP36L2P47974 494 aaKnown RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 NFKB2Q00653 900 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 ITIH5Q86UX2 942 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 BIRC7Q96CA5 298 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 MYEOVQ96EZ4 313 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 MS4A4AQ96JQ5 239 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 CYP2S1Q96SQ9 504 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 CHID1Q9BWS9 393 aa16.8■□□□□ 0.28
RTN1-201ENST00000267484 TUBA8Q9NY65 449 aaPredicted RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 IFT80Q9P2H3 777 aaPredicted RBP16.8■□□□□ 0.28
RTN1-201ENST00000267484 NPEPPSL1A6NEC2 478 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 ECI2O75521 394 aa16.79■□□□□ 0.28
RTN1-201ENST00000267484 UGT1A1P22309 533 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms