RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DPY19L3Q6ZPD9 716 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 HDDC3Q8N4P3 179 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 ZBTB2Q8N680 514 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 NT5C3BQ969T7 300 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 NOP53Q9NZM5 478 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 HSFX1Q9UBD0 423 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 WDR90Q96KV7 1748 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 PCCBP05166 539 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 WDR4P57081 412 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 CORO7P57737 925 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 TAF11Q15544 211 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 SNX20Q7Z614 316 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 PHYKPLQ8IUZ5 450 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 SPPL3Q8TCT6 385 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 SLC39A13Q96H72 371 aa14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 THUMPD3Q9BV44 507 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-201ENST00000265810 MGAT4DA6NG13 374 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 PEX11AO75192 247 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 MLYCDO95822 493 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ZC3HC1Q86WB0 502 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 SELENOMQ8WWX9 145 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 MARK4Q96L34 752 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ZNF778Q96MU6 729 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 FCRL3Q96P31 734 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 YIPF2Q9BWQ6 316 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 TTLL2Q9BWV7 592 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 PHPT1Q9NRX4 125 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 INTS10Q9NVR2 710 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 CORO1CQ9ULV4 474 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ATG13O75143 517 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 NIPSNAP2O75323 286 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ABLIM3O94929 683 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 NSG1P42857 185 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 MTHFRP42898 656 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 CLNS1AP54105 237 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 CHRNA6Q15825 494 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ATL1Q8WXF7 558 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 HERVK_113Q902F9 699 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 SLC22A12Q96S37 553 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 MTX2O75431 263 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 NQO1P15559 274 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 MAPK1P28482 360 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 FASTKQ14296 549 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ACAP2Q15057 778 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ITPRIPL2Q3MIP1 535 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 NAPRTQ6XQN6 538 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 TPRG1Q6ZUI0 275 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 ARHGAP12Q8IWW6 846 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 PIP4K2CQ8TBX8 421 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 PSME4Q14997 1843 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 PTPN4P29074 926 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 CPSF6Q16630 551 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 RALGPS1Q5JS13 557 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 LRRC66Q68CR7 880 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 SLC40A1Q9NP59 571 aa14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 SPATS2LQ9NUQ6 558 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-201ENST00000265810 H3BM21 787 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 MPSTP25325 297 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 TSNQ15631 228 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 PGS1Q32NB8 556 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 TXNDC11Q6PKC3 985 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 GPRIN3Q6ZVF9 776 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 ZNF513Q8N8E2 541 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 ECSITQ9BQ95 431 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 GATA5Q9BWX5 397 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 RNF103-CHMP3A0A140T963 221 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 NFYCQ13952 458 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 MRPL58Q14197 206 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 RBM20Q5T481 1227 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 PAQR3Q6TCH7 311 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 DPY30Q9C005 99 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 ZDHHC4Q9NPG8 344 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 CIDEBQ9UHD4 219 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 EDDM13A0A1B0GTR0 161 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 LCHNA4D1U4 455 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 EVPLLA8MZ36 301 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 WNT9AO14904 365 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 CEBPBP17676 345 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 MAGEA10P43363 369 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 PGFP49763 221 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 SHHQ15465 462 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 TAZQ16635 292 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 ARL13AQ5H913 290 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 TMEM220Q6QAJ8 160 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 SNX32Q86XE0 403 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 CLDN19Q8N6F1 224 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 FIBINQ8TAL6 211 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 SHKBP1Q8TBC3 707 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 NSUN3Q9H649 340 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-201ENST00000265810 DRGXA6NNA5 263 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 AZIN1O14977 448 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 WDR47O94967 919 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 IL10P22301 178 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 IRS1P35568 1242 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms