RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 TLDC1Q6P9B6 456 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 C4orf50Q6ZRC1 276 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 BEND5Q7L4P6 421 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 NET1Q7Z628 596 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 SETD3Q86TU7 594 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 OSTM1Q86WC4 334 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 LRRC49Q8IUZ0 686 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 KIRREL3Q8IZU9 778 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 SCML4Q8N228 414 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 LZTR1Q8N653 840 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 GPATCH11Q8N954 259 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 DNAAF3Q8N9W5 541 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 LSM14AQ8ND56 463 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 RDH11Q8TC12 318 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 PIWIL2Q8TC59 973 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 CLEC4CQ8WTT0 213 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 RNF34Q969K3 372 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 NXPE2Q96DL1 559 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 CMTM5Q96DZ9 223 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 CERS2Q96G23 380 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 SMARCD1Q96GM5 515 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 ARHGAP9Q9BRR9 750 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 CADM1Q9BY67 442 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 TRIM4Q9C037 500 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 IL22Q9GZX6 179 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 MIR1-1HGQ9H1L0 117 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 C1orf21Q9H246 121 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 VCX3BQ9H321 246 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 KCNK13Q9HB14 408 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 TM7SF3Q9NS93 570 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 ARL8BQ9NVJ2 186 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 DNAJC28Q9NX36 388 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 DDX43Q9NXZ2 648 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 ZNF212Q9UDV6 495 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 BCAP29Q9UHQ4 241 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 VANGL2Q9ULK5 521 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 HBS1LQ9Y450 684 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 L3MBTL1Q9Y468 752 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 LRRC42Q9Y546 428 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 RPS6KL1Q9Y6S9 549 aa7.06□□□□□ -1.28
SMARCE1-201ENST00000264640 UTP20O75691 2785 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SYNJ2BP-COX16A0A087WUM0 186 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 MEI4A8MW99 385 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 B2RBV5 119 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SLCO1B7G3V0H7 640 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 LEFTY2O00292 366 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 FGF10O15520 208 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 RRP8O43159 456 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 PLIN3O60664 434 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 NDUFS2O75306 463 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 FKBP6O75344 327 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ANXA9O76027 345 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 MAP3K6O95382 1288 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 WISP1O95388 367 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ITGA2BP08514 1039 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 TPBGLP0DKB5 382 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 RALBP11234 206 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 COL6A2P12110 1019 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 HOXB2P14652 356 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 VAV1P15498 845 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 GNSP15586 552 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ACADSP16219 412 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ERCC2P18074 760 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 PAMP19021 973 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ATP6V1C1P21283 382 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SLC1A6P48664 564 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 MAP3K7CLP57077 242 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 AP2B1P63010 937 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 MRPS35P82673 323 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 TSPY1Q01534 308 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 BNC1Q01954 994 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 PPIDQ08752 370 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 CDH17Q12864 832 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 MTM1Q13496 603 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 DHCR24Q15392 516 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SMAD1Q15797 465 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 HLA-BQ31612 363 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 TEX44Q53QW1 395 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 RAB6CQ53S08 254 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SYCP2LQ5T4T6 812 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 BSPRYQ5W0U4 402 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 WSCD1Q658N2 575 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 CLEC20AQ6ZU45 233 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ZNF534Q76KX8 674 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 BNIPLQ7Z465 357 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 MIB1Q86YT6 1006 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SCUBE1Q8IWY4 988 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ZNF567Q8N184 647 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 THEM5Q8N1Q8 247 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 AFAP1L2Q8N4X5 818 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ZNF513Q8N8E2 541 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 RNF217Q8TC41 542 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 SPPL2BQ8TCT7 592 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 PTPRN2Q92932 1015 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 UTP4Q969X6 686 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ISL2Q96A47 359 aa7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 ZNF669Q96BR6 464 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-201ENST00000264640 HDAC11Q96DB2 347 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms