RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 RIMKLBQ9ULI2 386 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 GPSM3Q9Y4H4 160 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 GPR179Q6PRD1 2367 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 OTOGLQ3ZCN5 2332 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 H0Y8X5 98 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 DNALI1O14645 258 aaPredicted RBP12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 RAD51BO15315 384 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 INPP4BO15327 924 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 PCDHGA12O60330 932 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 CDK14O94921 469 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 PRAMEF1O95521 474 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 TTC4O95801 387 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 BPIP17213 487 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 IGFALSP35858 605 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 HK3P52790 923 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 TMPRSS15P98073 1019 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 CDK3Q00526 305 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 CACNG1Q06432 222 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 ILF2Q12905 390 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 THOC5Q13769 683 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 FGL2Q14314 439 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 MRNIPQ6NTE8 343 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 TTC27Q6P3X3 843 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 SNX20Q7Z614 316 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 TAF8Q7Z7C8 310 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 KLHDC8BQ8IXV7 354 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 BEND7Q8N7W2 519 aaPredicted RBP12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 AVL9Q8NBF6 648 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 OR6C4Q8NGE1 309 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 CALML6Q8TD86 181 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 GLYATL1Q969I3 302 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 ERP44Q9BS26 406 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 CARS2Q9HA77 564 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 CYP4F12Q9HCS2 524 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 SMARCAL1Q9NZC9 954 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 ARL5AQ9Y689 179 aa12.47□□□□□ -0.41
CLNS1A-201ENST00000263309 MED19A0JLT2 244 aaPredicted RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TPP1O14773 563 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 KMOO15229 486 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TTI1O43156 1089 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 SPINT1O43278 529 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 AQP9O43315 295 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 LDOC1O95751 146 aaPredicted RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 NME1P15531 152 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 MC4RP32245 332 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 DAB2P98082 770 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.412e-8■■□□□ 12.5
CLNS1A-201ENST00000263309 CDKN3Q16667 212 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 PRRT3Q5FWE3 981 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 HENMT1Q5T8I9 393 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TCEAL6Q6IPX3 200 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 DOK6Q6PKX4 331 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 AFTPHQ6ULP2 937 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 FAM151BQ6UXP7 276 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 CENPUQ71F23 418 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 LMNTD2Q8IXW0 634 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 GPR26Q8NDV2 337 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 GSDMBQ8TAX9 411 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 SCAMP4Q969E2 229 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TCEAL3Q969E4 200 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 FUBP1Q96AE4 644 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 LRRC39Q96DD0 335 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 NSMCE3Q96MG7 304 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 COPS8Q99627 209 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 FAM129AQ9BZQ8 928 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 FOXP3Q9BZS1 431 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TRIM31Q9BZY9 425 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 MRM3Q9HC36 420 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TRNAU1APQ9NX07 287 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 WHRNQ9P202 907 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 FTSJ1Q9UET6 329 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 CA5BQ9Y2D0 317 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 TCAF1Q9Y4C2 921 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 SPO11Q9Y5K1 396 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 DGKBQ9Y6T7 804 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
CLNS1A-201ENST00000263309 THADAQ6YHU6 1953 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 SHROOM3Q8TF72 1996 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 PRSS38A1L453 326 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 GRID2O43424 1007 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 WNT1P04628 370 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 IVLP07476 585 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 GSTM1P09488 218 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 ZNF7P17097 686 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 MAGEA6P43360 314 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 GNPDA1P46926 289 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 PPM1FP49593 454 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 TTPAP49638 278 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 GSTM4Q03013 218 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 FZD2Q14332 565 aa12.45□□□□□ -0.42
CLNS1A-201ENST00000263309 CERCAMQ5T4B2 595 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms