RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 UGT1A6P19224 532 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 UGT1A1P22309 533 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 UGT1A4P22310 534 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 ACRV1P26436 265 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 UGT1A3P35503 534 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 UGT1A5P35504 534 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 PPARGP37231 505 aaPredicted RBP22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 PSMD8P48556 350 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 PON2Q15165 354 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 LEXMQ3ZCV2 418 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 CTSL3PQ5NE16 218 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 FBXL19Q6PCT2 694 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 LIPIQ6XZB0 460 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 PIM3Q86V86 326 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 DTX3LQ8TDB6 740 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 KCNV2Q8TDN2 545 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 LRRC8CQ8TDW0 803 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 UBXN10Q96LJ8 280 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 TSNARE1Q96NA8 513 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 HDAC8Q9BY41 377 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 RSPH9Q9H1X1 276 aaPredicted RBP22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 CCDC68Q9H2F9 335 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 GPAMQ9HCL2 828 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 SIRPGQ9P1W8 387 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 ITM2BQ9Y287 266 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 COMMD10Q9Y6G5 202 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 PLXNA2O75051 1894 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 RGSL1A5PLK6 1076 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 DNAJC6O75061 913 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 CD9P21926 228 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 SLC26A3P40879 764 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 IRX4P78413 519 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 ELP6Q0PNE2 266 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 TSNAXIP1Q2TAA8 658 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 TMEM207Q6UWW9 146 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 ERN2Q76MJ5 926 aaKnown RBP22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 TBC1D1Q86TI0 1168 aaPredicted RBP22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 NXPE1Q8N323 547 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 NXNL1Q96CM4 212 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 TTC1Q99614 292 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 GABRG3Q99928 467 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 MECRQ9BV79 373 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 NMRAL1Q9HBL8 299 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 DYRK4Q9NR20 520 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 RAD18Q9NS91 495 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 IGSF5Q9NSI5 407 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 CRLS1Q9UJA2 301 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 RUVBL2Q9Y230 463 aaKnown RBP22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 H0Y858 1186 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 PSMD11O00231 422 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 ESR1P03372 595 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 DRD1P21728 446 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 RPS3P23396 243 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 PCLAFQ15004 111 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 FAM46CQ5VWP2 391 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 Q6ZVL8 140 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 TECPR1Q7Z6L1 1165 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 RAVER1Q8IY67 606 aaKnown RBP22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 RBFAQ8N0V3 343 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 CCDC63Q8NA47 563 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 FAM107BQ9H098 131 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 MANSC1Q9H8J5 431 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 MTF2Q9Y483 593 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 PLXNB3Q9ULL4 1909 aa22.73■■□□□ 1.23
SMARCB1-201ENST00000263121 PLK4O00444 970 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 PRMT5O14744 637 aaPredicted RBP22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 RHOBTB1O94844 696 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 APOA4P06727 396 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 ELFN1P0C7U0 828 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 GLULP15104 373 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 GM2AP17900 193 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 NTSR1P30989 418 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 ITGA9Q13797 1035 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 ATP13A5Q4VNC0 1218 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 SETMARQ53H47 684 aaPredicted RBP22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 IER5LQ5T953 404 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 SPNS2Q8IVW8 549 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 TMEM151AQ8N4L1 468 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 ZNF473Q8WTR7 871 aaKnown RBP22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 ANKRD49Q8WVL7 239 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 ERLEC1Q96DZ1 483 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 CCDC97Q96F63 343 aaPredicted RBP22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 CDH19Q9H159 772 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 FAM83DQ9H4H8 585 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 TAS2R13Q9NYV9 303 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 COPG2Q9UBF2 871 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 CD84Q9UIB8 345 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 PCDHB1Q9Y5F3 818 aa22.72■■□□□ 1.23
SMARCB1-201ENST00000263121 GOLGA8CPA6NN73 597 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 NDUFAB1O14561 156 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 KLF11O14901 512 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 NARSO43776 548 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 ZNF7P17097 686 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 BGNP21810 368 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 ETV3P41162 512 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 P2RY2P41231 377 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 PFKPQ01813 784 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 SATB1Q01826 763 aa22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 GRSF1Q12849 480 aaKnown RBP eCLIP22.71■■□□□ 1.23
SMARCB1-201ENST00000263121 C2orf27AQ580R0 203 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms